G881607


Basic Information

Item Value
gene id G881607
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 34599539 ~ 34600021 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1003145
catcactacttgtatttattgacatggtattgacatgttgaatgcaccgagctgtctgtctaaactactggcacacagctgggacatccatacataccccacaagacatgccacaagaggtctcttcacagtcctcaagtccagaacagactatgggagaaacacagtactacatagagccatgactacatggaactctattccacatcaagtaactgatgcaaacagtaaaatatgatttaaaaaacagataaaaaaacaccttatggaacagaggggactgtgaagcaacacaaacataggcacagacacatacacccacacacacaataacatacgcactatacacacacatacacatggcttTAGTACTGtcgatatgtggtagtggtggagtatgGACCTGAGGGctcacagtgtgttgtgaaatctatgaatgtattgtaatgtttttaaaatggtataaactgccttaattttgct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1003145 True 483 lncRNA 0.40 1 34599539 34600021

Neighbor

gene id symbol gene type direction distance location
LOC110533713 LOC106603586 coding upstream 10230 34546928 ~ 34589309 (+)
taf9 LOC106603584 coding upstream 63978 34528720 ~ 34535561 (+)
LOC110534915 rps17 coding upstream 110782 34486712 ~ 34488757 (+)
rnasekb rnasek coding upstream 127271 34458769 ~ 34472268 (+)
LOC110533705 LOC106603578 coding upstream 157212 34437126 ~ 34443357 (+)
slc25a14 LOC106567890 coding downstream 10047 34610068 ~ 34618970 (+)
LOC110533716 LOC106603589 coding downstream 22387 34622408 ~ 34674877 (+)
LOC110533717 LOC106603590 coding downstream 122847 34722868 ~ 34741451 (+)
LOC110533719 LOC106603618 coding downstream 345705 34945666 ~ 34949276 (+)
LOC110533722 LOC106603594 coding downstream 371796 34971817 ~ 34975086 (+)
G881606 NA non-coding upstream 1198 34598127 ~ 34598341 (+)
G881531 LOC100194703 non-coding upstream 36719 34494555 ~ 34562820 (+)
G881507 NA non-coding upstream 200183 34399060 ~ 34399356 (+)
G881504 NA non-coding upstream 201758 34397525 ~ 34397781 (+)
LOC110533701 LOC106603576 non-coding upstream 202700 34391710 ~ 34397234 (+)
G881633 NA non-coding downstream 48526 34648547 ~ 34648928 (+)
G881640 NA non-coding downstream 85133 34685154 ~ 34685386 (+)
G881643 NA non-coding downstream 89310 34689331 ~ 34706014 (+)
G881679 NA non-coding downstream 179586 34779607 ~ 34779899 (+)
G881536 NA other upstream 105438 34489820 ~ 34494101 (+)
hsd20b2 LOC106603577 other upstream 164121 34422538 ~ 34435620 (+)
G882013 NA other downstream 208581 34808602 ~ 34811529 (+)
G882202 NA other downstream 475577 35075598 ~ 35075967 (+)
G882225 NA other downstream 507441 35107462 ~ 35109391 (+)
G882265 NA other downstream 561327 35161348 ~ 35163506 (+)

Expression


Co-expression Network