G881905


Basic Information

Item Value
gene id G881905
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 34617598 ~ 34621386 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1003477
CCCAAGCATGTATTAATATATATCAAAGTAATAATCAATGTGGTTGACAGCAAAATGCAGCTGGAGCCAATGAAAACAATAATTGTCCAATAAATCATAAAAAACAGCAGCAATGTTGTTCCTAAGCTAGACATGCTCACATACTGTAAGTAAAAGCATGCAGTAAGCCCTGCCAAGTGTTTAAACAGGAATGAGAGAAAAAGTACATAATATATTCTGCATTGCTGAGTAAAGGGGCAACAGGTTCAAGACTTCAAGAATGTGTTAAGTTCATATGGGAAAACATGATcatgcaataaataaataaaaatctaaaatAGATAATGCTTTGGAAAGAAATTCAATAAAAAAGTTACTCGTAAAGTACTTTCGGATTCTCTGTGGGGGAAAAAGTGTGTTACATCATTGTAAAGACACAGATAAAAGCTAAAAAGCTTGACTGCTCAGTAATGCACGACTGCTGAAACAACATATTAAGCAACAAAACTAGTAATTCTAATAAAAATCAACATGGCCATGGGACATGGGCAGAGGTGCAGAATCAGGCATCATATAAATTAGAAACATGATCACGAAAGTAAAGTATAAGGCCTGAGTAAGAATGTAACAGTACAGTTATCCTGATACTTTGGCAACTGACCTACTCAGACGGCGCTTTGCAACAGTGGTTCAATAAAGTACAGAACATGCACACTTTGGCACAACAGCCCCCATTATCCTAGTCCATTCAGGGCTTTACTCAAAGCTCAAAATAACAATTCAAAGCAGATTCTCCAAAGTAACTATGTACAAGTTAGACATGCCTGTCAAAATACAGTATCCAACTTTAcatgtgtgtatctctctgtacatacatttacataatgtacactgaacaaaaatataaacgcaacatgtaacgtgttggtcccatgtttcatgagctgaaataaaagatcacagaaatgttccatacgcacaaaaagcttatttctctcatattttgtacacaaatttgtttacatccctgttagtgagcatgttATCCtatgtcaagataatccatccacctgacaggtgtggcatatcaagattatcattacacagatgcaccttgtgctggggccaATAAAATGTGCAATTGTGTCACACaccacaatgctacagatgtctcaagttgagggagcgtgcaattggcatgctgacatcAGGAAAATTCAtgagagctgttgccagataatttaatattaatttctctaccataagcctccatCACTTTAgagactcattctgattggctgggcctggctccccagtaaaTCGcactggctcccaagtgggtgggcctatgccctcccaggcccacccatggctgcgcccctgcccagtcatgtgaaatccatatattagggcaataatttttttattttaattgactgatttccatacagttgaagtcagaagtttacatacaccttcacaattcctgacatttaatcctagtaaatattgcctgtcttaggtcagttaggatcaccactttatttagaagaatgtgaaatgtcagaataatagtagagagaatgatttatttcagcttttatttgtttcatcacattcccattgggtcagaagtttacataccctcaattagtatttggtagcatcgcctttaaattgtttaacttaggtcaaatatttcaggtagccttccacaagctccccacaataagttgggtgaattttggcccattcctcctgacagagctggtgtaactgagttaggtttgtaggcctcctaacTCACACACGCTTTCTcacttctgcccacaaattctctaaaggattgaggtcagggctttgtcatggccactccaataccttgactttcttgtcctcaagtcattttgccaaaactttggaagtatgcttggggtcattgtctgtttggaagacccatttgcgaccaagctttaactttagaAATTGCttgcaaggatgaaccagatttgtggaggtctacaattatttttctgagattttggctgatttatttggattttcctatgatgtcaagcaaagaggcagagtttgaaggtaggccttgaaaggccttgaaagacatccacaggtacacctccaattgactcaaatgatgtcaattagcctatcagaagcttctaaagccatgacataattttctggaattgtccaagctgtttaaagacacagtcaacttagtgtatgtaaacttctgacccactggaattgtgatagtgaattataaagtgaaataatctgtctgtaaacaattgttggaaagatgacttgtgtcatgcacaaagtagatgtcctaaccgacttgccaaaactatagtttgttaacaagaaatttgtggagtggttgaaaaacgagttttcatgactccaacctgagtgtatgtacttccaacttcaactgtatatgaactgtatctcagcaaaatctttgaaattgttgcctgttgtgttaatatttttgttcagtatactttcaTGGGAATCACCATGACAACCAAGCAGGTCCCAGAAAGTGTTTCCATTCCTGTGCATGTTTAGTGTTCCAGACAACAGCAGACACCTCTACTTCACACAAAAGGGTTGTGGTGAAATGTACAGAAAGCAAAGTCACTCTCCGGGTACCCAATAATGGCTTTGGTTCAACATTGGACTAAATTCCCATCACATCTTACTAAACATACATATAGTCTccccacataaaaaaaaatactagtttactatagaatactgcagtacttactatagaattatgTAGTAAACTATAGTATACGATACTACACTGCAGTGTACCTTAATCATTTGTAATACTTAATATAGAATATTTTAGTATAATGtaaaatactatagtaaatactacagtatactatagaCCACAAAAACACTGCACTAAGTATTACAGTAATGTCAGCAAAACTACAGTAAAGGcagcaaaaacactacaatgTATTTTAACCATAgtatagtattttttcatgtgggtcaCCGTTGTCCTGAGTACCTCTAACAGACTAAACAACACCTACTGTGACCTTTACTTACCCAGGTAAGTCATTGAGAATAAATTGTCTGACAATAACAACCCAGTTAACATGCCATGCATCGCATCCTCTTCTAGCTAGCCCTGCCCAAAACATTGAAGACATTATTTAAACGTCAGATCAGACAGGCAAAACCCCAATCCTATACATTTAACAGCCAAGGTCTTTTCTTGCACATCCCATGCAGTATAGAGATGTGTTTAAAAAACTAGTCAGACACAATCAGAGGCCTATTCCACATCCCTAAAAAAGCTCAAGTAGATCTCCAGTTACCGTTCCACCTAGGATagtcctcctccttttcccaCAAGCTCACTTTAAAATGGTAGCAAGCTGGCAGTCAGCGTACCTAGCTAATACCTTATGGTCCAAACGGGCTTCCGTCCTCAGCTACAATCCTAAGCTTTAGCTGCCAGGAGTGGCATCAAGGATGGTTGATGAGTATGAGgaagtattaaaaaaaaaaaaaaaacattaaaagttgtataaaaaaattataaatattATTATATTTAACTCAGATGAGCATGCACATACAGATTGTGTGACGAGGGAGGGATTGTGAATGAAATGAAGACAAAGGGCTGGGGTGTTTCCCTCGCTCTGATACACTCTGGTCCGACGGAGTGTCCACTCACTGTTCAACTATAAGGGGAGTTTCTTCAGCTGCTCAAACGTGATGAAGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1003477 True 3763 lncRNA 0.38 2 34617598 34621386

Neighbor

gene id symbol gene type direction distance location
LOC110534894 gpr119 coding downstream 18591 34597247 ~ 34599007 (-)
LOC110533714 rbmx2 coding downstream 21335 34589717 ~ 34596263 (-)
ap4m1 ap4m1 coding downstream 88821 34521230 ~ 34528777 (-)
LOC100335039 LOC100335039 coding downstream 108825 34494606 ~ 34560547 (-)
c10h17orf49 cssa04h17orf49 coding downstream 158097 34443569 ~ 34459501 (-)
LOC110533718 LOC106603592 coding upstream 269673 34891059 ~ 34893957 (-)
LOC118936924 NA coding upstream 303545 34924931 ~ 34925923 (-)
si:ch211-284e13.4 LOC106603593 coding upstream 332465 34953851 ~ 34967269 (-)
si:ch211-284e13.6 LOC106603595 coding upstream 358796 34980182 ~ 34989463 (-)
gucy2d LOC106603596 coding upstream 370971 34992357 ~ 35012867 (-)
G881897 NA non-coding downstream 7586 34609808 ~ 34610012 (-)
G881884 NA non-coding downstream 20474 34596835 ~ 34597124 (-)
G881883 NA non-coding downstream 20939 34596404 ~ 34596659 (-)
G881845 NA non-coding downstream 101709 34514141 ~ 34515889 (-)
G881916 NA non-coding upstream 15032 34636418 ~ 34636900 (-)
G881924 NA non-coding upstream 22093 34643479 ~ 34643709 (-)
G881945 NA non-coding upstream 56014 34677400 ~ 34677640 (-)
G881947 NA non-coding upstream 57959 34679345 ~ 34679582 (-)
G881949 NA non-coding upstream 60134 34681520 ~ 34681966 (-)
G881778 NA other downstream 200337 34413063 ~ 34417261 (-)
LOC110533687 NA other downstream 644286 33939072 ~ 33973312 (-)
G880994 NA other downstream 938759 33613325 ~ 33678839 (-)
G882578 NA other upstream 681528 35302914 ~ 35304055 (-)
G882539 NA other upstream 699428 35320814 ~ 35321706 (-)
G882631 NA other upstream 805863 35427249 ~ 35428208 (-)
G882971 rb1 other upstream 976931 35598317 ~ 35599085 (-)

Expression


Co-expression Network