G881950



Basic Information


Item Value
gene id G881950
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 34682175 ~ 34682401 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1003523
tgagttcctcagttaggtggttaactgattttgtcctctgacgtccttgggtagacagagggagtctggaaggacatcaaggaatctttgtgttgtctgtgaatttatagcacgacttttgatgctccttggttggggtctgagcagattatttgttgcaattgcaaacgtaataaaatgatggtccgatagtccaggattatgaggaaaaacattaagatccacaa

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1003523 True 227 lncRNA 0.41 1 34682175 34682401

Neighbor


gene id symbol gene type direction distance location
LOC110534894 gpr119 coding downstream 83168 34597247 ~ 34599007 (-)
LOC110533714 rbmx2 coding downstream 85912 34589717 ~ 34596263 (-)
ap4m1 ap4m1 coding downstream 153398 34521230 ~ 34528777 (-)
LOC100335039 LOC100335039 coding downstream 173402 34494606 ~ 34560547 (-)
c10h17orf49 cssa04h17orf49 coding downstream 222674 34443569 ~ 34459501 (-)
LOC110533718 LOC106603592 coding upstream 208658 34891059 ~ 34893957 (-)
LOC118936924 NA coding upstream 242530 34924931 ~ 34925923 (-)
si:ch211-284e13.4 LOC106603593 coding upstream 271450 34953851 ~ 34967269 (-)
si:ch211-284e13.6 LOC106603595 coding upstream 297781 34980182 ~ 34989463 (-)
gucy2d LOC106603596 coding upstream 309956 34992357 ~ 35012867 (-)
G881949 NA non-coding downstream 209 34681520 ~ 34681966 (-)
G881947 NA non-coding downstream 2593 34679345 ~ 34679582 (-)
G881945 NA non-coding downstream 4535 34677400 ~ 34677640 (-)
G881924 NA non-coding downstream 38466 34643479 ~ 34643709 (-)
G881916 NA non-coding downstream 45275 34636418 ~ 34636900 (-)
G881952 NA non-coding upstream 3759 34686160 ~ 34686376 (-)
G881953 NA non-coding upstream 4664 34687065 ~ 34687348 (-)
G881919 NA non-coding upstream 56922 34739323 ~ 34741133 (-)
G881995 NA non-coding upstream 103685 34786086 ~ 34786287 (-)
G882012 NA non-coding upstream 124893 34807294 ~ 34807807 (-)
G881778 NA other downstream 264914 34413063 ~ 34417261 (-)
LOC110533687 NA other downstream 708863 33939072 ~ 33973312 (-)
G880994 NA other downstream 1003336 33613325 ~ 33678839 (-)
G882578 NA other upstream 620513 35302914 ~ 35304055 (-)
G882539 NA other upstream 638413 35320814 ~ 35321706 (-)
G882631 NA other upstream 744848 35427249 ~ 35428208 (-)
G882971 rb1 other upstream 915916 35598317 ~ 35599085 (-)

Expression



Co-expression Network