G881686


Basic Information

Item Value
gene id G881686
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 34788952 ~ 34789297 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1003230
cagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggatttaaacttcttcacaacagtatctcggacctgcctggtgtgctccttgttcttcatgatgctctctgcgcttttaacggacctctgagactattacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttccgtttttgattcgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1003230 True 346 lncRNA 0.40 1 34788952 34789297

Neighbor

gene id symbol gene type direction distance location
LOC110533717 LOC106603590 coding upstream 47501 34722868 ~ 34741451 (+)
LOC110533716 LOC106603589 coding upstream 114075 34622408 ~ 34674877 (+)
slc25a14 LOC106567890 coding upstream 169982 34610068 ~ 34618970 (+)
LOC110533713 LOC106603586 coding upstream 199643 34546928 ~ 34589309 (+)
taf9 LOC106603584 coding upstream 253391 34528720 ~ 34535561 (+)
LOC110533719 LOC106603618 coding downstream 156429 34945666 ~ 34949276 (+)
LOC110533722 LOC106603594 coding downstream 182520 34971817 ~ 34975086 (+)
LOC110533726 LOC105023919 coding downstream 261641 35050938 ~ 35063464 (+)
gltpd2 LOC106603604 coding downstream 408654 35197951 ~ 35203782 (+)
mogat3b LOC106603399 coding downstream 518456 35307753 ~ 35321801 (+)
G881679 NA non-coding upstream 9053 34779607 ~ 34779899 (+)
G881643 NA non-coding upstream 82938 34689331 ~ 34706014 (+)
G881640 NA non-coding upstream 103566 34685154 ~ 34685386 (+)
G881633 NA non-coding upstream 140024 34648547 ~ 34648928 (+)
G881689 NA non-coding downstream 2150 34791447 ~ 34791675 (+)
G881690 NA non-coding downstream 3321 34792618 ~ 34792906 (+)
G882011 NA non-coding downstream 18114 34807411 ~ 34807782 (+)
G882028 NA non-coding downstream 42321 34831618 ~ 34831874 (+)
G882030 NA non-coding downstream 45436 34834733 ~ 34834959 (+)
G881536 NA other upstream 294851 34489820 ~ 34494101 (+)
LOC110534915 rps17 other upstream 300238 34486712 ~ 34488757 (+)
rnasekb rnasek other upstream 318574 34458769 ~ 34472268 (+)
LOC110533705 LOC106603578 other upstream 345595 34437126 ~ 34443357 (+)
G882013 NA other downstream 19305 34808602 ~ 34811529 (+)
G882202 NA other downstream 286301 35075598 ~ 35075967 (+)
G882225 NA other downstream 318165 35107462 ~ 35109391 (+)
G882265 NA other downstream 372051 35161348 ~ 35163506 (+)
G882300 NA other downstream 435800 35225097 ~ 35264333 (+)

Expression


Co-expression Network