G882019


Basic Information

Item Value
gene id G882019
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 34809266 ~ 34815933 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1003594
ttgtagtccatattgtagcccattttgtctcccatattgtatcccatattgtagtccatattgtagtccatattgtagtccatattgtatccaatattgtatcccatattgtagtccatattgtagtccatattgtatcccatattgtagtccatattgtagcccatattgtctcccatattgtatcccatattgtagtccatattgtagtccatattgtatcccatattgtagtccatattgtatcccatattgtatcccattttgtatcccatattgtagtccatattgtatcccatattgtagtccatattgtatcccatattgtagcccatattgtatcccatattgtatcccatattgtatcccatattgtagtccatattgtagcccatattgtctcccatattgtatcccatattgtattccatattgtagtccatattgaaTCTCATATTGTATCACATAAtgaatcccatattgtatcccatattgtatcccatattgtagtccatattgtagtccatattgtatcccatattgtatcccatattgtatcccatattgtagtccatattgaatctcatattgtatctcataatgaatcccatattgtatcccatattgtatcccatattgtatcccatattgtatcccatattgtagtccatattgtatcccatattgtagtccatattgtatcccatattgtagttcATATtatatcccatattgtatcccatattgtatcccatattgtatcccatattgtatcccatattgtagtccatattgtagtccatattgtatcccatattgtagcccata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1003594 True 828 lncRNA 0.33 3 34809266 34815933

Neighbor

gene id symbol gene type direction distance location
LOC110534894 gpr119 coding downstream 210259 34597247 ~ 34599007 (-)
LOC110533714 rbmx2 coding downstream 213003 34589717 ~ 34596263 (-)
ap4m1 ap4m1 coding downstream 280489 34521230 ~ 34528777 (-)
LOC100335039 LOC100335039 coding downstream 300493 34494606 ~ 34560547 (-)
c10h17orf49 cssa04h17orf49 coding downstream 349765 34443569 ~ 34459501 (-)
LOC110533718 LOC106603592 coding upstream 75126 34891059 ~ 34893957 (-)
LOC118936924 NA coding upstream 108998 34924931 ~ 34925923 (-)
si:ch211-284e13.4 LOC106603593 coding upstream 137918 34953851 ~ 34967269 (-)
si:ch211-284e13.6 LOC106603595 coding upstream 164249 34980182 ~ 34989463 (-)
gucy2d LOC106603596 coding upstream 176424 34992357 ~ 35012867 (-)
G882012 NA non-coding downstream 1459 34807294 ~ 34807807 (-)
G881995 NA non-coding downstream 22979 34786086 ~ 34786287 (-)
G881919 NA non-coding downstream 68133 34739323 ~ 34741133 (-)
G881953 NA non-coding downstream 121918 34687065 ~ 34687348 (-)
G881952 NA non-coding downstream 122890 34686160 ~ 34686376 (-)
G882031 NA non-coding upstream 18730 34834663 ~ 34834918 (-)
G882043 NA non-coding upstream 30402 34846335 ~ 34846847 (-)
G882050 NA non-coding upstream 36152 34852085 ~ 34852295 (-)
G882051 NA non-coding upstream 36480 34852413 ~ 34852678 (-)
G882075 NA non-coding upstream 53083 34869016 ~ 34869234 (-)
G881778 NA other downstream 392005 34413063 ~ 34417261 (-)
LOC110533687 NA other downstream 835954 33939072 ~ 33973312 (-)
G880994 NA other downstream 1130427 33613325 ~ 33678839 (-)
G882578 NA other upstream 486981 35302914 ~ 35304055 (-)
G882539 NA other upstream 504881 35320814 ~ 35321706 (-)
G882631 NA other upstream 611316 35427249 ~ 35428208 (-)
G882971 rb1 other upstream 782384 35598317 ~ 35599085 (-)

Expression


Co-expression Network