Gene
RNA
| Item | Value |
|---|---|
| gene id | G882460 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 35024928 ~ 35025447 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1004111 | False | 335 | lncRNA | 0.35 | 1 | 35024928 | 35025262 |
| TU1004114 | True | 520 | lncRNA | 0.39 | 1 | 35024928 | 35025447 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gucy2d | LOC106603596 | coding | downstream | 12061 | 34992357 ~ 35012867 (-) |
| si:ch211-284e13.6 | LOC106603595 | coding | downstream | 35465 | 34980182 ~ 34989463 (-) |
| si:ch211-284e13.4 | LOC106603593 | coding | downstream | 57659 | 34953851 ~ 34967269 (-) |
| LOC118936924 | NA | coding | downstream | 99005 | 34924931 ~ 34925923 (-) |
| LOC110533718 | LOC106603592 | coding | downstream | 130971 | 34891059 ~ 34893957 (-) |
| LOC110533724 | LOC106603597 | coding | upstream | 3820 | 35029267 ~ 35039130 (-) |
| LOC110533725 | LOC106603599 | coding | upstream | 16325 | 35041772 ~ 35044627 (-) |
| LOC110533727 | LOC106603600 | coding | upstream | 47070 | 35072517 ~ 35120162 (-) |
| LOC110533729 | LOC106603602 | coding | upstream | 97698 | 35123145 ~ 35159339 (-) |
| LOC118966630 | NA | coding | upstream | 134097 | 35159544 ~ 35160053 (-) |
| G882458 | NA | non-coding | downstream | 1145 | 35023579 ~ 35023783 (-) |
| G882457 | NA | non-coding | downstream | 1479 | 35023158 ~ 35023449 (-) |
| G882454 | NA | non-coding | downstream | 5388 | 35019320 ~ 35019540 (-) |
| G882450 | NA | non-coding | downstream | 19105 | 35005503 ~ 35005823 (-) |
| G882449 | NA | non-coding | downstream | 19754 | 35004948 ~ 35005174 (-) |
| G882461 | NA | non-coding | upstream | 417 | 35025864 ~ 35026308 (-) |
| G882380 | LOC105023919 | non-coding | upstream | 36347 | 35061794 ~ 35063411 (-) |
| G882379 | NA | non-coding | upstream | 38794 | 35064241 ~ 35068521 (-) |
| G882469 | NA | non-coding | upstream | 49287 | 35074734 ~ 35075000 (-) |
| LOC110534894 | gpr119 | other | downstream | 426253 | 34597247 ~ 34599007 (-) |
| LOC110533714 | rbmx2 | other | downstream | 428746 | 34589717 ~ 34596263 (-) |
| G881778 | NA | other | downstream | 607667 | 34413063 ~ 34417261 (-) |
| LOC110533687 | NA | other | downstream | 1051616 | 33939072 ~ 33973312 (-) |
| G882578 | NA | other | upstream | 277467 | 35302914 ~ 35304055 (-) |
| G882539 | NA | other | upstream | 295367 | 35320814 ~ 35321706 (-) |
| G882631 | NA | other | upstream | 401802 | 35427249 ~ 35428208 (-) |
| G882971 | rb1 | other | upstream | 572870 | 35598317 ~ 35599085 (-) |
| G883128 | NA | other | upstream | 855077 | 35880524 ~ 35880951 (-) |
