G882181


Basic Information

Item Value
gene id G882181
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 35025033 ~ 35025359 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1003777
GTACAAATGGATTCCAATATGATTCTGATAGAGGTGACACAAAATCCTACAGGATTACGAGAATCCAATAGGGTTTAATACAACTACTTTTGATTTTCAATAGGAAAGAAGTAGTCCAATAGGATTCAAATAGGATTCCATTAGAGGTGACACAAATACTATAGGGTTGCGAGAATCCTATAGGATTCTATTGGAAAAATCACTAATCCTATAGGATTTTTTTGACTAGGGTGCCTTTTAGGCTGTTTCAAAGGTAAGGTTCCTTGCAGGCAGAATAGCTCTCAGTGCTTTTAGGCTGAATCATATAATCCAGAGGGGGTGCGCTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1003777 True 327 lncRNA 0.38 1 35025033 35025359

Neighbor

gene id symbol gene type direction distance location
LOC110533722 LOC106603594 coding upstream 49947 34971817 ~ 34975086 (+)
LOC110533719 LOC106603618 coding upstream 75757 34945666 ~ 34949276 (+)
LOC110533717 LOC106603590 coding upstream 283582 34722868 ~ 34741451 (+)
LOC110533716 LOC106603589 coding upstream 350156 34622408 ~ 34674877 (+)
slc25a14 LOC106567890 coding upstream 406063 34610068 ~ 34618970 (+)
LOC110533726 LOC105023919 coding downstream 25579 35050938 ~ 35063464 (+)
gltpd2 LOC106603604 coding downstream 172592 35197951 ~ 35203782 (+)
mogat3b LOC106603399 coding downstream 282394 35307753 ~ 35321801 (+)
LOC118966749 NA coding downstream 332682 35358041 ~ 35362540 (+)
LOC110534898 LOC106603243 coding downstream 359111 35384470 ~ 35385650 (+)
G882163 LOC106603596 non-coding upstream 13554 35010382 ~ 35011479 (+)
G882162 NA non-coding upstream 15703 35009025 ~ 35009330 (+)
G882161 NA non-coding upstream 17385 35007039 ~ 35007648 (+)
G882152 LOC106603596 non-coding upstream 29433 34992511 ~ 34995600 (+)
G882128 NA non-coding upstream 70790 34950395 ~ 34954243 (+)
G882183 NA non-coding downstream 1455 35026814 ~ 35027229 (+)
G882184 NA non-coding downstream 2019 35027378 ~ 35027700 (+)
G882176 NA non-coding downstream 45992 35071351 ~ 35073337 (+)
G882201 NA non-coding downstream 49982 35075341 ~ 35075549 (+)
G882203 NA non-coding downstream 50758 35076117 ~ 35076604 (+)
G882013 NA other upstream 213504 34808602 ~ 34811529 (+)
G881536 NA other upstream 530932 34489820 ~ 34494101 (+)
LOC110534915 rps17 other upstream 536319 34486712 ~ 34488757 (+)
rnasekb rnasek other upstream 554655 34458769 ~ 34472268 (+)
G882202 NA other downstream 50239 35075598 ~ 35075967 (+)
G882225 NA other downstream 82103 35107462 ~ 35109391 (+)
G882265 NA other downstream 135989 35161348 ~ 35163506 (+)
G882300 NA other downstream 199738 35225097 ~ 35264333 (+)

Expression


Co-expression Network