G882184


Basic Information

Item Value
gene id G882184
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 35027378 ~ 35027700 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1003780
tcccaaccatgaagcatggtggtggcagcatcatgttgtgggggtgtttttctgcaggagggactggtgcacttcacaaaatagatggcatcatgaggagattgattatgtggatatattgaagcaacatctcaagacaggaagtcaggaagttaaagcttggtcacaaatgggtcttccaaatggacaatgaccccaagcatacttccaaagttgaggcaaaatggctttaagggcaacaaagtcaaggtattggagtggccatcacaaagccctgacctcatcctatagaaaatgtttgggtagaactgaaaaagcatgtg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1003780 True 323 lncRNA 0.44 1 35027378 35027700

Neighbor

gene id symbol gene type direction distance location
LOC110533722 LOC106603594 coding upstream 52292 34971817 ~ 34975086 (+)
LOC110533719 LOC106603618 coding upstream 78102 34945666 ~ 34949276 (+)
LOC110533717 LOC106603590 coding upstream 285927 34722868 ~ 34741451 (+)
LOC110533716 LOC106603589 coding upstream 352501 34622408 ~ 34674877 (+)
slc25a14 LOC106567890 coding upstream 408408 34610068 ~ 34618970 (+)
LOC110533726 LOC105023919 coding downstream 23238 35050938 ~ 35063464 (+)
gltpd2 LOC106603604 coding downstream 170251 35197951 ~ 35203782 (+)
mogat3b LOC106603399 coding downstream 280053 35307753 ~ 35321801 (+)
LOC118966749 NA coding downstream 330341 35358041 ~ 35362540 (+)
LOC110534898 LOC106603243 coding downstream 356770 35384470 ~ 35385650 (+)
G882183 NA non-coding upstream 149 35026814 ~ 35027229 (+)
G882181 NA non-coding upstream 2019 35025033 ~ 35025359 (+)
G882163 LOC106603596 non-coding upstream 15899 35010382 ~ 35011479 (+)
G882162 NA non-coding upstream 18048 35009025 ~ 35009330 (+)
G882161 NA non-coding upstream 19730 35007039 ~ 35007648 (+)
G882176 NA non-coding downstream 43651 35071351 ~ 35073337 (+)
G882201 NA non-coding downstream 47641 35075341 ~ 35075549 (+)
G882203 NA non-coding downstream 48417 35076117 ~ 35076604 (+)
G882180 NA non-coding downstream 49651 35077351 ~ 35078624 (+)
G882204 NA non-coding downstream 50991 35078691 ~ 35079122 (+)
G882013 NA other upstream 215849 34808602 ~ 34811529 (+)
G881536 NA other upstream 533277 34489820 ~ 34494101 (+)
LOC110534915 rps17 other upstream 538664 34486712 ~ 34488757 (+)
rnasekb rnasek other upstream 557000 34458769 ~ 34472268 (+)
G882202 NA other downstream 47898 35075598 ~ 35075967 (+)
G882225 NA other downstream 79762 35107462 ~ 35109391 (+)
G882265 NA other downstream 133648 35161348 ~ 35163506 (+)
G882300 NA other downstream 197397 35225097 ~ 35264333 (+)

Expression


Co-expression Network