G882201


Basic Information

Item Value
gene id G882201
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 35075341 ~ 35075549 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1003804
GCTGTGAAGTGACAAAAATGTATAGCTAGCAAGAAGTGGGTGAAAACTGTGGAGGAGGTTTTTACATCAATACCTGTCAAGTTTGGGCATCTAATCAATAAAACAGGTTATTATTCATGTTCTGTAGCTATTTTAGGTGTGTATGTATTCGATCTGATTTGGAAGAACTTGTGGGGGCTTAAGGATATTCTGCCCCCATAGTTTCTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1003804 True 209 lncRNA 0.39 1 35075341 35075549

Neighbor

gene id symbol gene type direction distance location
LOC110533726 LOC105023919 coding upstream 11877 35050938 ~ 35063464 (+)
LOC110533722 LOC106603594 coding upstream 100255 34971817 ~ 34975086 (+)
LOC110533719 LOC106603618 coding upstream 126065 34945666 ~ 34949276 (+)
LOC110533717 LOC106603590 coding upstream 333890 34722868 ~ 34741451 (+)
LOC110533716 LOC106603589 coding upstream 400464 34622408 ~ 34674877 (+)
gltpd2 LOC106603604 coding downstream 122402 35197951 ~ 35203782 (+)
mogat3b LOC106603399 coding downstream 232204 35307753 ~ 35321801 (+)
LOC118966749 NA coding downstream 282492 35358041 ~ 35362540 (+)
LOC110534898 LOC106603243 coding downstream 308921 35384470 ~ 35385650 (+)
LOC110534900 LOC106603243 coding downstream 333587 35409136 ~ 35410259 (+)
G882176 NA non-coding upstream 2004 35071351 ~ 35073337 (+)
G882184 NA non-coding upstream 47641 35027378 ~ 35027700 (+)
G882183 NA non-coding upstream 48112 35026814 ~ 35027229 (+)
G882181 NA non-coding upstream 49982 35025033 ~ 35025359 (+)
G882163 LOC106603596 non-coding upstream 63862 35010382 ~ 35011479 (+)
G882203 NA non-coding downstream 568 35076117 ~ 35076604 (+)
G882180 NA non-coding downstream 1802 35077351 ~ 35078624 (+)
G882204 NA non-coding downstream 3142 35078691 ~ 35079122 (+)
G882206 NA non-coding downstream 5071 35080620 ~ 35080971 (+)
G882214 LOC106603600 non-coding downstream 13182 35088731 ~ 35094643 (+)
G882013 NA other upstream 263812 34808602 ~ 34811529 (+)
G881536 NA other upstream 581240 34489820 ~ 34494101 (+)
LOC110534915 rps17 other upstream 586627 34486712 ~ 34488757 (+)
rnasekb rnasek other upstream 604963 34458769 ~ 34472268 (+)
G882202 NA other downstream 49 35075598 ~ 35075967 (+)
G882225 NA other downstream 31913 35107462 ~ 35109391 (+)
G882265 NA other downstream 85799 35161348 ~ 35163506 (+)
G882300 NA other downstream 149548 35225097 ~ 35264333 (+)

Expression


Co-expression Network