G882219


Basic Information

Item Value
gene id G882219
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 35097993 ~ 35098570 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1003824
CTCACCCCCACCCTCCAATCAAAAATACACCCCACCCTCCAACAACCATTATATGGAAAACACAAAATAGCTCAACCCAAATTACAGAGGCCTCAGTCAGGTTCAGGCCGgcccttccctctctcacccttctctcccctcttcttgcGTGTGCGGTCAATGTGGTCTTTGAGCTGGATGCGGACTTGGCGCTCTGTGGGCTGGTCCCGGATGAATGAGTGCTTCAAGAGCTGCTCTGTGGACGGCCGGCTGGTGTACGTCTTCACCAGGCAGCCCTCAATAAAATCTATAAACTTCTTAGACCTGAAGGGGGGGGTAATGAATGTAAGAGTCAGGTGAGGCAGAGGAGGATAATGAGTAACATCTGTTTGGTGGACAGAGATGGGACAGCTGGTGTGAGTGGGACTTTTAGGAGGCCTGGTATCTCCTGTAGGTCACATGTAATTGGGAATGAAACTATCCCAAGAAGAGTGTTcagaaaaagagaagaagaacaggaaaggtctgtgtgtgtgggagagtgaaaTAGAGACAGCAAGACAGTCAGTGTCCATTCATTTAAAGTGGCAATGTACAAC

Function

NR:

description
misshapen-like kinase 1 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1003824 True 578 lncRNA 0.49 1 35097993 35098570

Neighbor

gene id symbol gene type direction distance location
LOC110533726 LOC105023919 coding upstream 34529 35050938 ~ 35063464 (+)
LOC110533722 LOC106603594 coding upstream 122907 34971817 ~ 34975086 (+)
LOC110533719 LOC106603618 coding upstream 148717 34945666 ~ 34949276 (+)
LOC110533717 LOC106603590 coding upstream 356542 34722868 ~ 34741451 (+)
LOC110533716 LOC106603589 coding upstream 423116 34622408 ~ 34674877 (+)
gltpd2 LOC106603604 coding downstream 99381 35197951 ~ 35203782 (+)
mogat3b LOC106603399 coding downstream 209183 35307753 ~ 35321801 (+)
LOC118966749 NA coding downstream 259471 35358041 ~ 35362540 (+)
LOC110534898 LOC106603243 coding downstream 285900 35384470 ~ 35385650 (+)
LOC110534900 LOC106603243 coding downstream 310566 35409136 ~ 35410259 (+)
G882218 NA non-coding upstream 1387 35096386 ~ 35096606 (+)
G882217 NA non-coding upstream 2477 35095230 ~ 35095516 (+)
G882214 LOC106603600 non-coding upstream 3350 35088731 ~ 35094643 (+)
G882206 NA non-coding upstream 17022 35080620 ~ 35080971 (+)
G882204 NA non-coding upstream 18871 35078691 ~ 35079122 (+)
G882222 NA non-coding downstream 5117 35103687 ~ 35104107 (+)
G882223 NA non-coding downstream 6242 35104812 ~ 35105103 (+)
G882232 NA non-coding downstream 17799 35116369 ~ 35116585 (+)
G882234 NA non-coding downstream 18734 35117304 ~ 35117528 (+)
G882237 NA non-coding downstream 20447 35119017 ~ 35119972 (+)
G882202 NA other upstream 22026 35075598 ~ 35075967 (+)
G882013 NA other upstream 286464 34808602 ~ 34811529 (+)
G881536 NA other upstream 603892 34489820 ~ 34494101 (+)
LOC110534915 rps17 other upstream 609279 34486712 ~ 34488757 (+)
G882225 NA other downstream 8892 35107462 ~ 35109391 (+)
G882265 NA other downstream 62778 35161348 ~ 35163506 (+)
G882300 NA other downstream 126527 35225097 ~ 35264333 (+)
G882624 NA other downstream 316405 35414975 ~ 35416238 (+)

Expression


Co-expression Network