G882223


Basic Information

Item Value
gene id G882223
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 35104812 ~ 35105103 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1003828
gcagagagaagaagagaaataatagaaaaataataacacaaggcataaacacagggtaccagtaccaagtcaatgtgcaggggtacaaggttaTTGAGGTAGACATGAACATATAGATGggtataaagtgactagtcaatAGGATAGATAAACTGCAACAGCTTTTGGATGAGTCAAAagagtgcaaaaagggtcaatgcagattgtGCGAGTAGCTATTGATTaaatagatacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1003828 True 292 lncRNA 0.38 1 35104812 35105103

Neighbor

gene id symbol gene type direction distance location
LOC110533726 LOC105023919 coding upstream 41348 35050938 ~ 35063464 (+)
LOC110533722 LOC106603594 coding upstream 129726 34971817 ~ 34975086 (+)
LOC110533719 LOC106603618 coding upstream 155536 34945666 ~ 34949276 (+)
LOC110533717 LOC106603590 coding upstream 363361 34722868 ~ 34741451 (+)
LOC110533716 LOC106603589 coding upstream 429935 34622408 ~ 34674877 (+)
gltpd2 LOC106603604 coding downstream 92848 35197951 ~ 35203782 (+)
mogat3b LOC106603399 coding downstream 202650 35307753 ~ 35321801 (+)
LOC118966749 NA coding downstream 252938 35358041 ~ 35362540 (+)
LOC110534898 LOC106603243 coding downstream 279367 35384470 ~ 35385650 (+)
LOC110534900 LOC106603243 coding downstream 304033 35409136 ~ 35410259 (+)
G882222 NA non-coding upstream 705 35103687 ~ 35104107 (+)
G882219 NA non-coding upstream 6242 35097993 ~ 35098570 (+)
G882218 NA non-coding upstream 8206 35096386 ~ 35096606 (+)
G882217 NA non-coding upstream 9296 35095230 ~ 35095516 (+)
G882214 LOC106603600 non-coding upstream 10169 35088731 ~ 35094643 (+)
G882232 NA non-coding downstream 11266 35116369 ~ 35116585 (+)
G882234 NA non-coding downstream 12201 35117304 ~ 35117528 (+)
G882237 NA non-coding downstream 13914 35119017 ~ 35119972 (+)
G882236 NA non-coding downstream 15182 35120285 ~ 35121216 (+)
G882264 NA non-coding downstream 55207 35160310 ~ 35160662 (+)
G882202 NA other upstream 28845 35075598 ~ 35075967 (+)
G882013 NA other upstream 293283 34808602 ~ 34811529 (+)
G881536 NA other upstream 610711 34489820 ~ 34494101 (+)
LOC110534915 rps17 other upstream 616098 34486712 ~ 34488757 (+)
G882225 NA other downstream 2359 35107462 ~ 35109391 (+)
G882265 NA other downstream 56245 35161348 ~ 35163506 (+)
G882300 NA other downstream 119994 35225097 ~ 35264333 (+)
G882624 NA other downstream 309872 35414975 ~ 35416238 (+)

Expression


Co-expression Network