G882267


Basic Information

Item Value
gene id G882267
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 35171987 ~ 35174824 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1003874
gttgtatTGTTATGTTGCAGCAGGTGTGGTCTGTCTCACCAGGGAGATGAGGTTGGTCAGAATCAGCTTGACCTCCACCTTGTCTGTGGGGTGCGCTGCTGGACAAATACTCTTGTTGTAGCTTCTGAACACGTCCCCAATCAGCTTAGACTTCATTACAACTCACCCGCTGCCCCTCGCTTCGCTTCTCCTGCTGTCGCTACACCCACGGCTCGGGTTAGACAGCAGCCGGAAACCGCTCAATTCTGTCGACATTCTGGTCGTCCATAATAATTATCATTATGCTATTGGGTGGTGGTGACACCGATTATGAAGGTAATGTTTCTGTTTGATATGTCAGCTAGTTTCAAACTATGAATAGCCCAACACTATGCCGGAAAACACAACTGAACACTTTGAAAACG

Function

NR:

description
acetylcholine receptor subunit epsilon-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1003874 True 404 lncRNA 0.48 2 35171987 35174824

Neighbor

gene id symbol gene type direction distance location
LOC110533726 LOC105023919 coding upstream 108523 35050938 ~ 35063464 (+)
LOC110533722 LOC106603594 coding upstream 196901 34971817 ~ 34975086 (+)
LOC110533719 LOC106603618 coding upstream 222711 34945666 ~ 34949276 (+)
LOC110533717 LOC106603590 coding upstream 430536 34722868 ~ 34741451 (+)
LOC110533716 LOC106603589 coding upstream 497110 34622408 ~ 34674877 (+)
gltpd2 LOC106603604 coding downstream 23127 35197951 ~ 35203782 (+)
mogat3b LOC106603399 coding downstream 132929 35307753 ~ 35321801 (+)
LOC118966749 NA coding downstream 183217 35358041 ~ 35362540 (+)
LOC110534898 LOC106603243 coding downstream 209646 35384470 ~ 35385650 (+)
LOC110534900 LOC106603243 coding downstream 234312 35409136 ~ 35410259 (+)
G882264 NA non-coding upstream 11325 35160310 ~ 35160662 (+)
G882236 NA non-coding upstream 50771 35120285 ~ 35121216 (+)
G882237 NA non-coding upstream 52015 35119017 ~ 35119972 (+)
G882234 NA non-coding upstream 54459 35117304 ~ 35117528 (+)
G882232 NA non-coding upstream 55402 35116369 ~ 35116585 (+)
G882271 NA non-coding downstream 4822 35179646 ~ 35179984 (+)
G882272 NA non-coding downstream 5210 35180034 ~ 35180331 (+)
G882293 LOC106603606 non-coding downstream 43141 35217965 ~ 35218391 (+)
G882299 NA non-coding downstream 50832 35225656 ~ 35228524 (+)
G882301 NA non-coding downstream 54042 35228866 ~ 35234190 (+)
G882265 NA other upstream 8481 35161348 ~ 35163506 (+)
G882225 NA other upstream 62596 35107462 ~ 35109391 (+)
G882202 NA other upstream 96020 35075598 ~ 35075967 (+)
G882013 NA other upstream 360458 34808602 ~ 34811529 (+)
G882300 NA other downstream 50273 35225097 ~ 35264333 (+)
G882624 NA other downstream 240151 35414975 ~ 35416238 (+)
LOC110533748 prps1 other downstream 507831 35674201 ~ 35686573 (+)
G883473 om-i other downstream 1118490 36292302 ~ 36295572 (+)

Expression


Co-expression Network