G882511


Basic Information

Item Value
gene id G882511
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 35177845 ~ 35178504 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1004181
gttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacgacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccaaatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctatagatctctgcagttcatccagagtgatcatgggccttttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattgtcgcttgcacagtgctccttgggatgtttaaggcttgggaaatatttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagaga

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1004181 True 660 lncRNA 0.43 1 35177845 35178504

Neighbor

gene id symbol gene type direction distance location
LOC110534897 LOC106603603 coding downstream 5703 35163598 ~ 35172142 (-)
LOC118966630 NA coding downstream 17792 35159544 ~ 35160053 (-)
LOC110533729 LOC106603602 coding downstream 18506 35123145 ~ 35159339 (-)
LOC110533727 LOC106603600 coding downstream 57683 35072517 ~ 35120162 (-)
LOC110533725 LOC106603599 coding downstream 133218 35041772 ~ 35044627 (-)
LOC110533731 LOC106603606 coding upstream 33313 35211817 ~ 35245860 (-)
LOC110533732 LOC106603400 coding upstream 72151 35250655 ~ 35292455 (-)
LOC110533734 LOC106603397 coding upstream 152228 35330732 ~ 35341314 (-)
LOC110533735 rn167 coding upstream 166089 35344593 ~ 35357905 (-)
defbl1 NA coding upstream 191610 35367515 ~ 35370773 (-)
G882506 NA non-coding downstream 14257 35161292 ~ 35163588 (-)
G882388 NA non-coding downstream 56660 35120277 ~ 35121185 (-)
G882486 NA non-coding downstream 60449 35117193 ~ 35117396 (-)
G882483 NA non-coding downstream 68049 35109587 ~ 35109796 (-)
G882481 NA non-coding downstream 72464 35105099 ~ 35105381 (-)
G882513 NA non-coding upstream 808 35179312 ~ 35179537 (-)
G882514 NA non-coding upstream 1133 35179637 ~ 35179853 (-)
G882517 NA non-coding upstream 3818 35182322 ~ 35182602 (-)
G882385 NA non-coding upstream 29688 35208192 ~ 35277138 (-)
G882540 NA non-coding upstream 48679 35227183 ~ 35233864 (-)
LOC110533718 LOC106603592 other downstream 283917 34891059 ~ 34893957 (-)
LOC110534894 gpr119 other downstream 579170 34597247 ~ 34599007 (-)
LOC110533714 rbmx2 other downstream 581663 34589717 ~ 34596263 (-)
G881778 NA other downstream 760584 34413063 ~ 34417261 (-)
LOC110533687 NA other downstream 1204533 33939072 ~ 33973312 (-)
G882578 NA other upstream 124410 35302914 ~ 35304055 (-)
G882539 NA other upstream 142310 35320814 ~ 35321706 (-)
G882631 NA other upstream 248745 35427249 ~ 35428208 (-)
G882971 rb1 other upstream 419813 35598317 ~ 35599085 (-)
G883128 NA other upstream 702020 35880524 ~ 35880951 (-)

Expression


Co-expression Network