G882299


Basic Information

Item Value
gene id G882299
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 35225656 ~ 35228524 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1003919
CCGTATAccactctctctatctttatcatactatactactctgtctttatcacactataccactctgtctttatcacactataccactctatccctgTCTTTATCACCGTATAccactctctctatctttatcatactataccactctgtctttatcacactataccactctgtctttatcacactataccactctctctatctttatcatactataccactctgtctttatcacactataccactctgtctttatcacactataccactctatctttctttatcacactataccactctctctgtctttatcaccctatacctctctctctgtctttctcaccctataccactctctctgtctttatcacaatATAccactctctgtctttatcaccctataccactctctctctgtctttatcacactataccactctgtctaaatcacactatacaactctctctgtctttatcaccctataccactctctctatctttatcacactacaacactcgatctgtctttatcaccctataccactctctctgtctttatcaccctatacaactctctctgtctttatcaccctataccactctctctttctttatcacactatacaactctctttctttatcacactataccactctctctgtctttatcacactataccactctctttctttatcacactataccactcgctctgtctttatcacactataccactctctctgcctttatcaccctataccactctctctgcctttatcaccctataccactctctctgtctttatcacactataccactctctctttctttatcaccctataccactctctctgtctttatcacactataccactctctctgtctttatcacactataccactctctctgcctttatcacactataccactctctctgtctttatcacactataccactctctctgtctttatcacactataccactctctctgtctttatcacactataccactctctctttctttatcaccctataccactctctctgtctttatcacactataccactctctctgtctttatcacactataccactctctctgtctttatcacactataccactctctctgcctttatcaccgtataccactctctctgtctttatcacactataccactctctctgtctttatcacactataccactctctctgtctttatcacactataccactctctctttctttatcaccctataccactctctctgtctttatcacactataccactctctctgtctttatcacactataccactctctgtatttatcacactatacc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106573561

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1003919 True 1349 lncRNA 0.39 2 35225656 35228524

Neighbor

gene id symbol gene type direction distance location
gltpd2 LOC106603604 coding upstream 21874 35197951 ~ 35203782 (+)
LOC110533726 LOC105023919 coding upstream 162192 35050938 ~ 35063464 (+)
LOC110533722 LOC106603594 coding upstream 250570 34971817 ~ 34975086 (+)
LOC110533719 LOC106603618 coding upstream 276380 34945666 ~ 34949276 (+)
LOC110533717 LOC106603590 coding upstream 484205 34722868 ~ 34741451 (+)
mogat3b LOC106603399 coding downstream 79229 35307753 ~ 35321801 (+)
LOC118966749 NA coding downstream 129517 35358041 ~ 35362540 (+)
LOC110534898 LOC106603243 coding downstream 155946 35384470 ~ 35385650 (+)
LOC110534900 LOC106603243 coding downstream 180612 35409136 ~ 35410259 (+)
nlrc3l1 LOC106603395 coding downstream 267676 35496200 ~ 35500355 (+)
G882293 LOC106603606 non-coding upstream 7265 35217965 ~ 35218391 (+)
G882272 NA non-coding upstream 45325 35180034 ~ 35180331 (+)
G882271 NA non-coding upstream 45672 35179646 ~ 35179984 (+)
G882267 NA non-coding upstream 50832 35171987 ~ 35174824 (+)
G882264 NA non-coding upstream 64994 35160310 ~ 35160662 (+)
G882301 NA non-coding downstream 342 35228866 ~ 35234190 (+)
G882300 NA non-coding downstream 6796 35225097 ~ 35264333 (+)
G882335 NA non-coding downstream 63157 35291681 ~ 35292311 (+)
G882336 NA non-coding downstream 66071 35294595 ~ 35295398 (+)
G882265 NA other upstream 62150 35161348 ~ 35163506 (+)
G882225 NA other upstream 116265 35107462 ~ 35109391 (+)
G882202 NA other upstream 149689 35075598 ~ 35075967 (+)
G882013 NA other upstream 414127 34808602 ~ 34811529 (+)
LOC110533716 LOC106603589 other upstream 591749 34622408 ~ 34674877 (+)
G882624 NA other downstream 186451 35414975 ~ 35416238 (+)
LOC110533748 prps1 other downstream 454131 35674201 ~ 35686573 (+)
G883473 om-i other downstream 1064790 36292302 ~ 36295572 (+)
LOC110533788 NA other downstream 1570861 36799376 ~ 36801589 (+)

Expression


Co-expression Network