Gene
RNA
| Item | Value |
|---|---|
| gene id | G883202 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 35990569 ~ 35993332 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1004997 | True | 1077 | lncRNA | 0.38 | 3 | 35990569 | 35993332 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533760 | LOC106603380 | coding | upstream | 907 | 35887135 ~ 35989671 (+) |
| LOC110534918 | cchcr1 | coding | upstream | 118359 | 35865115 ~ 35872210 (+) |
| LOC110533751 | LOC106603389 | coding | upstream | 286496 | 35697166 ~ 35704073 (+) |
| LOC110533748 | prps1 | coding | upstream | 304254 | 35674201 ~ 35686573 (+) |
| LOC110533745 | LOC106603391 | coding | upstream | 329110 | 35627608 ~ 35661459 (+) |
| LOC110533766 | LOC106603376 | coding | downstream | 132748 | 36126080 ~ 36138679 (+) |
| LOC110533099 | pde2a | coding | downstream | 148337 | 36141669 ~ 36183062 (+) |
| LOC110533767 | mtmr2 | coding | downstream | 189903 | 36183235 ~ 36194217 (+) |
| fam76b | LOC106603374 | coding | downstream | 201242 | 36194574 ~ 36202847 (+) |
| LOC110533770 | LOC106603373 | coding | downstream | 226035 | 36219367 ~ 36246315 (+) |
| G883158 | NA | non-coding | upstream | 87435 | 35902820 ~ 35903134 (+) |
| G882828 | NA | non-coding | upstream | 121100 | 35818068 ~ 35869469 (+) |
| G882789 | NA | non-coding | upstream | 253270 | 35736797 ~ 35737299 (+) |
| G883242 | NA | non-coding | downstream | 90439 | 36083771 ~ 36086700 (+) |
| G883277 | NA | non-coding | downstream | 166373 | 36159705 ~ 36159908 (+) |
| G883412 | NA | non-coding | downstream | 168048 | 36161380 ~ 36161595 (+) |
| G883425 | NA | non-coding | downstream | 181153 | 36174485 ~ 36174897 (+) |
| G882624 | NA | other | upstream | 574331 | 35414975 ~ 35416238 (+) |
| mogat3b | LOC106603399 | other | upstream | 668768 | 35307753 ~ 35321801 (+) |
| G882300 | NA | other | upstream | 755344 | 35225097 ~ 35264333 (+) |
| G882265 | NA | other | upstream | 827063 | 35161348 ~ 35163506 (+) |
| G883473 | om-i | other | downstream | 299982 | 36292302 ~ 36295572 (+) |
| LOC110533788 | NA | other | downstream | 806053 | 36799376 ~ 36801589 (+) |
| G883966 | NA | other | downstream | 856314 | 36849646 ~ 36851153 (+) |
| LOC110533845 | LOC106603305 | other | downstream | 2762177 | 38755443 ~ 38815017 (+) |
| G889906 | LOC106603262 | other | downstream | 5718995 | 41712327 ~ 41717292 (+) |
