Gene
RNA
| Item | Value |
|---|---|
| gene id | G883421 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 36177165 ~ 36177404 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1005244 | True | 240 | lncRNA | 0.40 | 1 | 36177165 | 36177404 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533766 | LOC106603376 | coding | upstream | 38486 | 36126080 ~ 36138679 (+) |
| LOC110533760 | LOC106603380 | coding | upstream | 187503 | 35887135 ~ 35989671 (+) |
| LOC110534918 | cchcr1 | coding | upstream | 304955 | 35865115 ~ 35872210 (+) |
| LOC110533751 | LOC106603389 | coding | upstream | 473092 | 35697166 ~ 35704073 (+) |
| LOC110533748 | prps1 | coding | upstream | 490850 | 35674201 ~ 35686573 (+) |
| LOC110533767 | mtmr2 | coding | downstream | 5831 | 36183235 ~ 36194217 (+) |
| fam76b | LOC106603374 | coding | downstream | 17170 | 36194574 ~ 36202847 (+) |
| LOC110533770 | LOC106603373 | coding | downstream | 41963 | 36219367 ~ 36246315 (+) |
| LOC110533771 | LOC106603372 | coding | downstream | 71470 | 36248874 ~ 36256624 (+) |
| LOC110533775 | LOC106603239 | coding | downstream | 124450 | 36301854 ~ 36303664 (+) |
| G883425 | NA | non-coding | upstream | 2268 | 36174485 ~ 36174897 (+) |
| G883412 | NA | non-coding | upstream | 15570 | 36161380 ~ 36161595 (+) |
| G883277 | NA | non-coding | upstream | 17257 | 36159705 ~ 36159908 (+) |
| G883242 | NA | non-coding | upstream | 90465 | 36083771 ~ 36086700 (+) |
| G883202 | NA | non-coding | upstream | 183833 | 35990569 ~ 35993332 (+) |
| G883426 | NA | non-coding | downstream | 418 | 36177822 ~ 36178082 (+) |
| G883429 | NA | non-coding | downstream | 3339 | 36180743 ~ 36180976 (+) |
| G883444 | NA | non-coding | downstream | 26895 | 36204299 ~ 36204683 (+) |
| G883507 | NA | non-coding | downstream | 113038 | 36290442 ~ 36290667 (+) |
| G883508 | NA | non-coding | downstream | 113686 | 36291090 ~ 36291311 (+) |
| G882624 | NA | other | upstream | 760927 | 35414975 ~ 35416238 (+) |
| mogat3b | LOC106603399 | other | upstream | 855364 | 35307753 ~ 35321801 (+) |
| G882300 | NA | other | upstream | 941940 | 35225097 ~ 35264333 (+) |
| G882265 | NA | other | upstream | 1013659 | 35161348 ~ 35163506 (+) |
| G883473 | om-i | other | downstream | 115910 | 36292302 ~ 36295572 (+) |
| LOC110533788 | NA | other | downstream | 621981 | 36799376 ~ 36801589 (+) |
| G883966 | NA | other | downstream | 672242 | 36849646 ~ 36851153 (+) |
| LOC110533845 | LOC106603305 | other | downstream | 2578105 | 38755443 ~ 38815017 (+) |
| G889906 | LOC106603262 | other | downstream | 5534923 | 41712327 ~ 41717292 (+) |
