G883535


Basic Information

Item Value
gene id G883535
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 36344901 ~ 36345134 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1005386
gtaatacactacgccgccagggactcaaatcctgcagtgccctgcttaagccagtacatgtccaggcccgtctgatatttgctagagagcatttggatgatccagaagaagattgggagaatgtcatatggtcagatgaaaccaaaatataactttttggtaaaaactccactcgtcgtgtttggaggacaaagaatgctgagttgcatccaaagaacaccatacctactgtga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1005386 True 234 lncRNA 0.44 1 36344901 36345134

Neighbor

gene id symbol gene type direction distance location
LOC110533775 LOC106603239 coding upstream 41237 36301854 ~ 36303664 (+)
LOC110533771 LOC106603372 coding upstream 88277 36248874 ~ 36256624 (+)
LOC110533770 LOC106603373 coding upstream 98586 36219367 ~ 36246315 (+)
fam76b LOC106603374 coding upstream 142054 36194574 ~ 36202847 (+)
LOC110533767 mtmr2 coding upstream 150684 36183235 ~ 36194217 (+)
LOC110533776 LOC106603369 coding downstream 4936 36350070 ~ 36377139 (+)
tmprss4b LOC106603365 coding downstream 300586 36645720 ~ 36650306 (+)
LOC110533779 LOC106603362 coding downstream 338732 36683866 ~ 36698702 (+)
LOC110533102 NA coding downstream 357584 36702718 ~ 36704449 (+)
LOC110533781 NA coding downstream 366817 36711951 ~ 36713863 (+)
G883529 NA non-coding upstream 4350 36340038 ~ 36340551 (+)
G883528 NA non-coding upstream 5065 36339503 ~ 36339836 (+)
G883523 NA non-coding upstream 11215 36333465 ~ 36333686 (+)
G883513 LOC106603370 non-coding upstream 18458 36317104 ~ 36326443 (+)
G883473 om-i non-coding upstream 49329 36292302 ~ 36295572 (+)
G883550 NA non-coding downstream 41298 36386432 ~ 36388747 (+)
G883552 NA non-coding downstream 44166 36389300 ~ 36390922 (+)
G883554 NA non-coding downstream 47939 36393073 ~ 36393318 (+)
G883555 NA non-coding downstream 48263 36393397 ~ 36393598 (+)
LOC110533748 prps1 other upstream 658328 35674201 ~ 35686573 (+)
G882624 NA other upstream 928663 35414975 ~ 35416238 (+)
mogat3b LOC106603399 other upstream 1023100 35307753 ~ 35321801 (+)
G882300 NA other upstream 1109676 35225097 ~ 35264333 (+)
LOC110533788 NA other downstream 454251 36799376 ~ 36801589 (+)
G883966 NA other downstream 504512 36849646 ~ 36851153 (+)
LOC110533845 LOC106603305 other downstream 2410375 38755443 ~ 38815017 (+)
G889906 LOC106603262 other downstream 5367193 41712327 ~ 41717292 (+)
G890228 NA other downstream 5733081 42078215 ~ 42154093 (+)

Expression


Co-expression Network