Gene
RNA
| Item | Value |
|---|---|
| gene id | G883550 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 36386432 ~ 36388747 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1005401 | True | 233 | lncRNA | 0.40 | 2 | 36386432 | 36388747 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533776 | LOC106603369 | coding | upstream | 9293 | 36350070 ~ 36377139 (+) |
| LOC110533775 | LOC106603239 | coding | upstream | 82768 | 36301854 ~ 36303664 (+) |
| LOC110533771 | LOC106603372 | coding | upstream | 129808 | 36248874 ~ 36256624 (+) |
| LOC110533770 | LOC106603373 | coding | upstream | 140117 | 36219367 ~ 36246315 (+) |
| fam76b | LOC106603374 | coding | upstream | 183585 | 36194574 ~ 36202847 (+) |
| tmprss4b | LOC106603365 | coding | downstream | 256973 | 36645720 ~ 36650306 (+) |
| LOC110533779 | LOC106603362 | coding | downstream | 295119 | 36683866 ~ 36698702 (+) |
| LOC110533102 | NA | coding | downstream | 313971 | 36702718 ~ 36704449 (+) |
| LOC110533781 | NA | coding | downstream | 323204 | 36711951 ~ 36713863 (+) |
| LOC110533785 | LOC106603357 | coding | downstream | 399713 | 36788460 ~ 36793079 (+) |
| G883535 | NA | non-coding | upstream | 41298 | 36344901 ~ 36345134 (+) |
| G883529 | NA | non-coding | upstream | 45881 | 36340038 ~ 36340551 (+) |
| G883528 | NA | non-coding | upstream | 46596 | 36339503 ~ 36339836 (+) |
| G883523 | NA | non-coding | upstream | 52746 | 36333465 ~ 36333686 (+) |
| G883552 | NA | non-coding | downstream | 553 | 36389300 ~ 36390922 (+) |
| G883554 | NA | non-coding | downstream | 4326 | 36393073 ~ 36393318 (+) |
| G883555 | NA | non-coding | downstream | 4650 | 36393397 ~ 36393598 (+) |
| G883481 | NA | non-coding | downstream | 6082 | 36394829 ~ 36395502 (+) |
| G883480 | LOC106603368 | non-coding | downstream | 8285 | 36397032 ~ 36400250 (+) |
| G883473 | om-i | other | upstream | 90885 | 36292302 ~ 36295572 (+) |
| LOC110533748 | prps1 | other | upstream | 699859 | 35674201 ~ 35686573 (+) |
| G882624 | NA | other | upstream | 970194 | 35414975 ~ 35416238 (+) |
| mogat3b | LOC106603399 | other | upstream | 1064631 | 35307753 ~ 35321801 (+) |
| G882300 | NA | other | upstream | 1151207 | 35225097 ~ 35264333 (+) |
| LOC110533788 | NA | other | downstream | 410638 | 36799376 ~ 36801589 (+) |
| G883966 | NA | other | downstream | 460899 | 36849646 ~ 36851153 (+) |
| LOC110533845 | LOC106603305 | other | downstream | 2366762 | 38755443 ~ 38815017 (+) |
| G889906 | LOC106603262 | other | downstream | 5323580 | 41712327 ~ 41717292 (+) |
| G890228 | NA | other | downstream | 5689468 | 42078215 ~ 42154093 (+) |
