Gene
RNA
| Item | Value |
|---|---|
| gene id | G883556 |
| gene name | LOC106603368 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 36400351 ~ 36400949 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Down syndrome cell adhesion molecule-like protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1005408 | True | 599 | lncRNA | 0.53 | 1 | 36400351 | 36400949 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533776 | LOC106603369 | coding | upstream | 23212 | 36350070 ~ 36377139 (+) |
| LOC110533775 | LOC106603239 | coding | upstream | 96687 | 36301854 ~ 36303664 (+) |
| LOC110533771 | LOC106603372 | coding | upstream | 143727 | 36248874 ~ 36256624 (+) |
| LOC110533770 | LOC106603373 | coding | upstream | 154036 | 36219367 ~ 36246315 (+) |
| fam76b | LOC106603374 | coding | upstream | 197504 | 36194574 ~ 36202847 (+) |
| tmprss4b | LOC106603365 | coding | downstream | 244771 | 36645720 ~ 36650306 (+) |
| LOC110533779 | LOC106603362 | coding | downstream | 282917 | 36683866 ~ 36698702 (+) |
| LOC110533102 | NA | coding | downstream | 301769 | 36702718 ~ 36704449 (+) |
| LOC110533781 | NA | coding | downstream | 311002 | 36711951 ~ 36713863 (+) |
| LOC110533785 | LOC106603357 | coding | downstream | 387511 | 36788460 ~ 36793079 (+) |
| G883480 | LOC106603368 | non-coding | upstream | 101 | 36397032 ~ 36400250 (+) |
| G883481 | NA | non-coding | upstream | 4849 | 36394829 ~ 36395502 (+) |
| G883555 | NA | non-coding | upstream | 6753 | 36393397 ~ 36393598 (+) |
| G883554 | NA | non-coding | upstream | 7033 | 36393073 ~ 36393318 (+) |
| G883552 | NA | non-coding | upstream | 9429 | 36389300 ~ 36390922 (+) |
| G883558 | NA | non-coding | downstream | 923 | 36401872 ~ 36402398 (+) |
| G883559 | LOC106567837 | non-coding | downstream | 1841 | 36402790 ~ 36403079 (+) |
| G883616 | NA | non-coding | downstream | 162934 | 36563883 ~ 36564497 (+) |
| G883847 | LOC106603367 | non-coding | downstream | 217931 | 36618880 ~ 36620197 (+) |
| G883858 | NA | non-coding | downstream | 237530 | 36638479 ~ 36638687 (+) |
| G883473 | om-i | other | upstream | 104804 | 36292302 ~ 36295572 (+) |
| LOC110533748 | prps1 | other | upstream | 713778 | 35674201 ~ 35686573 (+) |
| G882624 | NA | other | upstream | 984113 | 35414975 ~ 35416238 (+) |
| mogat3b | LOC106603399 | other | upstream | 1078550 | 35307753 ~ 35321801 (+) |
| G882300 | NA | other | upstream | 1165126 | 35225097 ~ 35264333 (+) |
| LOC110533788 | NA | other | downstream | 398436 | 36799376 ~ 36801589 (+) |
| G883966 | NA | other | downstream | 448697 | 36849646 ~ 36851153 (+) |
| LOC110533845 | LOC106603305 | other | downstream | 2354560 | 38755443 ~ 38815017 (+) |
| G889906 | LOC106603262 | other | downstream | 5311378 | 41712327 ~ 41717292 (+) |
| G890228 | NA | other | downstream | 5677266 | 42078215 ~ 42154093 (+) |
