G883765


Basic Information

Item Value
gene id G883765
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 36428571 ~ 36486542 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1005635
TTCTATCTGATGAAGTGGGCAGTATTCTGAGAGTAATGtcctgtagacagtatgtgtagacagtatgtgtggacagtatgtgtagacagtatgtgtagacagtgtgtgtagacagtatgtgtggacagtatgtgtggacagtaggtgttgacagtatgtgtagacagtatgtgtagacagtatgtgtagacagtatgtgtggacagtaggtgttgacagtatgtgtagacagtatgtgtagactgcatgtgtggacagtatgtgtggacagtaggtgttgacagtatgtgtagacagtatgtgtagactgtatgtgtggacagtatgtgtggacagtagttgttgacagtatgtgtagacagtatgtgtagacagtatgtgtggacagtatgtgtagacagtaggtgtagacagtatgtgtagacagtaggtgtggacaccatgtgtggacagtatgtgtagacagaatgtgtagacagtaggtgtggacaccatgtgtggacagtatgtgtagacagaatgtgtggacagtaggtgtggacagtaggtgtagacagtattgtagacagtatgtgtggacagtaggtgtagacagtaggtgtagacagtatgtgtagacagtatgtgtggacagcatgtgtagacagtatgtgtagacagtatttgtggacagtattgtagacagtatgtgtggacagtatgtgtggacagtatgtgtggacagtattgtagacagtatgtgtggacagtatgtgtagacagtatgtgtggacagtaagtgtggacagtaggtgttgacagtatgtgtagacagtatgtgtagacagtatgtgtggacagtaggtgtggacactatgtgtggacagtatgtgtagacagaatgtgtggacagtaggtgtggacagtaggtgtagacagtattgtagacagtatgtgtggacagtaggtgtggacagtatgtgtagacagtgtgtgtggacagaaggtgtagacagtaggtgtggacagtaggtgtagacagtatgtgtggacagtaggtgtagacagtattgtagacagtaggtgtagacagtaggtgtggacagtaggtgtagacagtattgtagacagtatgtgtagacagtatgtgtagacagcaggtgttgacaggatgtgtagacagtaggtgtagacagtatgtgtagacagtatgtgtggacagtatgtgtggacagtaggtgtagacagtattgtagacagtatgtgtggacaataggtgtggacagtattgtagacagtatgtgtggacagtaggtgtagacagtaggtgttgacagtatgtgtagacagtatgtgtagactgcatgtgtggacagtatgtgtggacagtaggtgtggacagtaggtgtagacagtaggtgtagactgtatgtgtggacagtatgtgtagacagtatgtgtagacagtatgtgtggaaagtattgtagacagtatgtgtggacagtatgtgtggacagtatgtgtggacagtattgtagacagtatgtgtggacagtatgtgtagacagtaggtgtatac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106566327

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1005635 True 1559 lncRNA 0.44 2 36428571 36486542

Neighbor

gene id symbol gene type direction distance location
LOC110533773 LOC106603370 coding downstream 86752 36303733 ~ 36341819 (-)
epd om-i coding downstream 133054 36293313 ~ 36295517 (-)
LOC110533772 panx1 coding downstream 138850 36277054 ~ 36289721 (-)
ercc6l ercc6l coding downstream 310811 36104781 ~ 36117760 (-)
LOC110533762 LOC106603377 coding downstream 325923 36086295 ~ 36102648 (-)
LOC118966763 NA coding upstream 111830 36598367 ~ 36604502 (-)
tmprss13b LOC106603367 coding upstream 131589 36618131 ~ 36635441 (-)
scn4bb LOC106603364 coding upstream 166165 36652707 ~ 36665717 (-)
LOC110533101 LOC106603363 coding upstream 185825 36672252 ~ 36682903 (-)
LOC110533780 LOC106603359 coding upstream 217905 36704447 ~ 36711929 (-)
G883713 NA non-coding downstream 33071 36394801 ~ 36395500 (-)
G883756 NA non-coding downstream 35198 36393142 ~ 36393373 (-)
G883746 NA non-coding downstream 50290 36377993 ~ 36378281 (-)
G883715 LOC106603369 non-coding downstream 51481 36373714 ~ 36377090 (-)
G883741 NA non-coding downstream 78138 36350138 ~ 36350433 (-)
G883791 NA non-coding upstream 43866 36530408 ~ 36564899 (-)
G883808 NA non-coding upstream 65597 36552139 ~ 36553940 (-)
G883822 NA non-coding upstream 91472 36578014 ~ 36578453 (-)
G884366 NA non-coding upstream 152716 36639258 ~ 36639500 (-)
G883754 NA other downstream 36044 36391103 ~ 36392527 (-)
G883753 NA other downstream 37657 36389997 ~ 36390914 (-)
G883128 NA other downstream 547620 35880524 ~ 35880951 (-)
G882971 rb1 other downstream 829486 35598317 ~ 35599085 (-)
G882631 NA other downstream 1000363 35427249 ~ 35428208 (-)
G884736 NA other upstream 830375 37316917 ~ 37318864 (-)
LOC110533823 LOC106603321 other upstream 1112091 37518096 ~ 37704039 (-)
G885767 NA other upstream 1752408 38238950 ~ 38240559 (-)
rpl36a LOC106568029 other upstream 2697156 39183698 ~ 39185578 (-)

Expression


Co-expression Network