G883864 (LOC106603364)


Basic Information

Item Value
gene id G883864
gene name LOC106603364
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 36654696 ~ 36654921 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1005744
CTCGTCCACCACGACAAGGGTAAAGATAGCGCTGTGGTTCTTGCCCTTCTCTTTGGGGTTGCGTCCGAAGCAGGTGTACTGGCCCTCGTCCTCAAAGGTGATGTTCCAAAGCAGGATGGAGATGTTGTTGTGATCACTGGTGCCGATAAACTCCACCCGCTCCCGGTAGATACTCACTGGATGAGGATCCATCCCGTCTGACGGAATCACTGACTCACAAACCTGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1005744 True 226 lncRNA 0.54 1 36654696 36654921

Neighbor

gene id symbol gene type direction distance location
tmprss4b LOC106603365 coding upstream 4390 36645720 ~ 36650306 (+)
LOC110533776 LOC106603369 coding upstream 277557 36350070 ~ 36377139 (+)
LOC110533775 LOC106603239 coding upstream 351032 36301854 ~ 36303664 (+)
LOC110533771 LOC106603372 coding upstream 398072 36248874 ~ 36256624 (+)
LOC110533770 LOC106603373 coding upstream 408381 36219367 ~ 36246315 (+)
LOC110533779 LOC106603362 coding downstream 28945 36683866 ~ 36698702 (+)
LOC110533102 NA coding downstream 47797 36702718 ~ 36704449 (+)
LOC110533781 NA coding downstream 57030 36711951 ~ 36713863 (+)
LOC110533785 LOC106603357 coding downstream 133539 36788460 ~ 36793079 (+)
LOC110533788 NA coding downstream 144455 36799376 ~ 36801589 (+)
G883859 NA non-coding upstream 13489 36640992 ~ 36641207 (+)
G883858 NA non-coding upstream 16009 36638479 ~ 36638687 (+)
G883847 LOC106603367 non-coding upstream 34499 36618880 ~ 36620197 (+)
G883616 NA non-coding upstream 90199 36563883 ~ 36564497 (+)
G883559 LOC106567837 non-coding upstream 251617 36402790 ~ 36403079 (+)
G883877 NA non-coding downstream 11717 36666638 ~ 36666901 (+)
G883906 NA non-coding downstream 75661 36730582 ~ 36730810 (+)
G883889 NA non-coding downstream 78667 36733588 ~ 36746662 (+)
G883914 NA non-coding downstream 95443 36750364 ~ 36750630 (+)
G883473 om-i other upstream 359149 36292302 ~ 36295572 (+)
LOC110533748 prps1 other upstream 968123 35674201 ~ 35686573 (+)
G882624 NA other upstream 1238458 35414975 ~ 35416238 (+)
mogat3b LOC106603399 other upstream 1332895 35307753 ~ 35321801 (+)
G882300 NA other upstream 1419471 35225097 ~ 35264333 (+)
G883966 NA other downstream 194725 36849646 ~ 36851153 (+)
LOC110533845 LOC106603305 other downstream 2100588 38755443 ~ 38815017 (+)
G889906 LOC106603262 other downstream 5057406 41712327 ~ 41717292 (+)
G890228 NA other downstream 5423294 42078215 ~ 42154093 (+)

Expression


Co-expression Network