G883928


Basic Information

Item Value
gene id G883928
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 36788377 ~ 36880760 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1005833
AACAAAAACATATGGACAGTACCGaaacaaattatctaatgattctgtctctttgtcacgttctgaccttagttttttttgttatgtctttgttttaggttggtcagggtgtgagttggggtgggttgtctatgttcgtttttctatgttgtgttttgtgtttggcctggtatggttcgcaatcagaggcaggtgtcgttagttgtctctgattgagaatcatacttgtttcctgttttgttaccattcaggactgtttcggttttcggttccattcactttgttattgttgTATTGAGTCGTGTTCAGTTATTATTAAagtatcatggacacttaccacgctgcgtattg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1005833 True 351 lncRNA 0.38 2 36788377 36880760

Neighbor

gene id symbol gene type direction distance location
LOC110533781 NA coding upstream 74514 36711951 ~ 36713863 (+)
LOC110533102 NA coding upstream 83928 36702718 ~ 36704449 (+)
LOC110533779 LOC106603362 coding upstream 89675 36683866 ~ 36698702 (+)
tmprss4b LOC106603365 coding upstream 138071 36645720 ~ 36650306 (+)
LOC110533776 LOC106603369 coding upstream 411238 36350070 ~ 36377139 (+)
LOC110533794 ppme1 coding downstream 51489 36932249 ~ 36955772 (+)
diablob LOC106603345 coding downstream 107892 36988652 ~ 36997229 (+)
nectin3b LOC106603344 coding downstream 120180 37000940 ~ 37070420 (+)
ppm1nb ppm1n coding downstream 219885 37100645 ~ 37112941 (+)
LOC110533802 bhmg1 coding downstream 254436 37135196 ~ 37142473 (+)
G883916 NA non-coding upstream 11250 36755465 ~ 36777127 (+)
G883918 NA non-coding upstream 12634 36772662 ~ 36775743 (+)
G883914 NA non-coding upstream 37747 36750364 ~ 36750630 (+)
G883889 NA non-coding upstream 41715 36733588 ~ 36746662 (+)
G883906 NA non-coding upstream 57567 36730582 ~ 36730810 (+)
G883989 NA non-coding downstream 17877 36898637 ~ 36899051 (+)
G884004 NA non-coding downstream 41723 36922483 ~ 36922835 (+)
G884006 NA non-coding downstream 45786 36926546 ~ 36996330 (+)
G884064 NA non-coding downstream 208802 37089562 ~ 37091654 (+)
G884113 NA non-coding downstream 291864 37172624 ~ 37173512 (+)
G883473 om-i other upstream 492830 36292302 ~ 36295572 (+)
LOC110533748 prps1 other upstream 1101804 35674201 ~ 35686573 (+)
G882624 NA other upstream 1372139 35414975 ~ 35416238 (+)
mogat3b LOC106603399 other upstream 1466576 35307753 ~ 35321801 (+)
G882300 NA other upstream 1553152 35225097 ~ 35264333 (+)
LOC110533845 LOC106603305 other downstream 1874749 38755443 ~ 38815017 (+)
G889906 LOC106603262 other downstream 4831567 41712327 ~ 41717292 (+)
G890228 NA other downstream 5197455 42078215 ~ 42154093 (+)
G891133 NA other downstream 6101922 42982682 ~ 43109676 (+)
G891188 NA other downstream 6215960 43096720 ~ 43097617 (+)

Expression


Co-expression Network