Gene
RNA
| Item | Value |
|---|---|
| gene id | G884719 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 37293272 ~ 37293563 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1006727 | True | 292 | lncRNA | 0.38 | 1 | 37293272 | 37293563 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533809 | LOC106603335 | coding | downstream | 44819 | 37202094 ~ 37248453 (-) |
| LOC110533810 | NA | coding | downstream | 48988 | 37243492 ~ 37244284 (-) |
| LOC110533808 | LOC106603409 | coding | downstream | 97816 | 37193113 ~ 37195456 (-) |
| LOC110533807 | LOC106603336 | coding | downstream | 108258 | 37178008 ~ 37185014 (-) |
| itpkca | LOC106603337 | coding | downstream | 116472 | 37157662 ~ 37176800 (-) |
| chmp1b | LOC106603331 | coding | upstream | 54909 | 37348472 ~ 37351594 (-) |
| LOC110533816 | LOC106603328 | coding | upstream | 68626 | 37362189 ~ 37395821 (-) |
| LOC110533817 | LOC105026967 | coding | upstream | 106232 | 37399405 ~ 37402750 (-) |
| LOC110533823 | LOC106603321 | coding | upstream | 224533 | 37518096 ~ 37704039 (-) |
| LOC110533824 | LOC106603320 | coding | upstream | 549971 | 37843534 ~ 37867857 (-) |
| G884705 | NA | non-coding | downstream | 37186 | 37255887 ~ 37256086 (-) |
| sdhaf1 | sdhaf1 | non-coding | downstream | 170595 | 37119655 ~ 37123249 (-) |
| G884653 | NA | non-coding | downstream | 180340 | 37112151 ~ 37112932 (-) |
| G884542 | NA | non-coding | downstream | 254763 | 36996492 ~ 37038509 (-) |
| G884519 | NA | non-coding | downstream | 370906 | 36922166 ~ 36922366 (-) |
| G884725 | NA | non-coding | upstream | 7209 | 37300772 ~ 37301123 (-) |
| G884728 | NA | non-coding | upstream | 12601 | 37306164 ~ 37306394 (-) |
| G884735 | NA | non-coding | upstream | 26236 | 37319799 ~ 37320543 (-) |
| G884749 | NA | non-coding | upstream | 48709 | 37342272 ~ 37342503 (-) |
| G884750 | NA | non-coding | upstream | 49845 | 37343408 ~ 37343880 (-) |
| scn4bb | LOC106603364 | other | downstream | 627915 | 36652707 ~ 36665717 (-) |
| G883754 | NA | other | downstream | 900745 | 36391103 ~ 36392527 (-) |
| G883753 | NA | other | downstream | 902358 | 36389997 ~ 36390914 (-) |
| G883128 | NA | other | downstream | 1412321 | 35880524 ~ 35880951 (-) |
| G882971 | rb1 | other | downstream | 1694187 | 35598317 ~ 35599085 (-) |
| G884736 | NA | other | upstream | 23354 | 37316917 ~ 37318864 (-) |
| G885767 | NA | other | upstream | 945387 | 38238950 ~ 38240559 (-) |
| rpl36a | LOC106568029 | other | upstream | 1890135 | 39183698 ~ 39185578 (-) |
| G887329 | NA | other | upstream | 1923750 | 39217313 ~ 39217738 (-) |
