G884735


Basic Information

Item Value
gene id G884735
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 37319799 ~ 37320543 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1006745
TATTTTTATTAGGAAAGAAACTAATTATGTTCTGCTTTGCATAGTCACTAACTAGCTTTACAATGACCTGCTGTTGTCTGTCGGGGCTAGTGTACGTTTCTATATGGATATGGAGTAAATGTAGTCAAGGCTTTGATGCTGAATTCTATAAATGCTATGGAGGTGATAACTGGTGGGGGGAGGGATATGGTCAAAACTCAACAAATACAGTGTCTCACACTGAACAAAACATGGAATTGTTTTGAACTGCCAAATAAATACATCTAGTGTTGTGTTCAGCAACACGTGTTGGTTAATTGAAGCTCAATTTAATCCGTGGCACTAAAGACAGAGACTGCGTTCACGGTAAATGCATGTTGACTCAATCTGAAATTACCTTTACCTTTCTACAGCGCTGAGCTTAAATGAGCACAATATGTGCCAAATTGTTCCTTTACTCATAGAATGTATTATTTGCCCATCACCGGTGTGGAAGTTCATATCCAAAACCCTAGCTTGgagtattaaaaaataaaatcaaaatcGATCACAATTGATGCATTAAGCACATCTTTATCATAACTCCTCTCAAAAATATATTCATTGCATTAAAAACTAGCCTAAAGCACATTCACATTATTTTCTGAGACATTACAATTCTCTAGGTTAACCAAATGTTATGCGAAGAGTCTTCTCCTGCTCTTTGCGTCGGTTGTCGCAGAGTTTGGACACATCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1006745 True 716 lncRNA 0.37 2 37319799 37320543

Neighbor

gene id symbol gene type direction distance location
LOC110533809 LOC106603335 coding downstream 71346 37202094 ~ 37248453 (-)
LOC110533810 NA coding downstream 75515 37243492 ~ 37244284 (-)
LOC110533808 LOC106603409 coding downstream 124343 37193113 ~ 37195456 (-)
LOC110533807 LOC106603336 coding downstream 134785 37178008 ~ 37185014 (-)
itpkca LOC106603337 coding downstream 142999 37157662 ~ 37176800 (-)
chmp1b LOC106603331 coding upstream 27929 37348472 ~ 37351594 (-)
LOC110533816 LOC106603328 coding upstream 41646 37362189 ~ 37395821 (-)
LOC110533817 LOC105026967 coding upstream 79252 37399405 ~ 37402750 (-)
LOC110533823 LOC106603321 coding upstream 197553 37518096 ~ 37704039 (-)
LOC110533824 LOC106603320 coding upstream 522991 37843534 ~ 37867857 (-)
G884728 NA non-coding downstream 13405 37306164 ~ 37306394 (-)
G884725 NA non-coding downstream 18676 37300772 ~ 37301123 (-)
G884719 NA non-coding downstream 26236 37293272 ~ 37293563 (-)
G884705 NA non-coding downstream 63713 37255887 ~ 37256086 (-)
sdhaf1 sdhaf1 non-coding downstream 197122 37119655 ~ 37123249 (-)
G884749 NA non-coding upstream 21729 37342272 ~ 37342503 (-)
G884750 NA non-coding upstream 22865 37343408 ~ 37343880 (-)
G884764 NA non-coding upstream 83063 37403606 ~ 37403856 (-)
G884806 NA non-coding upstream 141146 37461689 ~ 37464531 (-)
G884736 NA other downstream 935 37316917 ~ 37318864 (-)
scn4bb LOC106603364 other downstream 654442 36652707 ~ 36665717 (-)
G883754 NA other downstream 927272 36391103 ~ 36392527 (-)
G883753 NA other downstream 928885 36389997 ~ 36390914 (-)
G883128 NA other downstream 1438848 35880524 ~ 35880951 (-)
G885767 NA other upstream 918407 38238950 ~ 38240559 (-)
rpl36a LOC106568029 other upstream 1863155 39183698 ~ 39185578 (-)
G887329 NA other upstream 1896770 39217313 ~ 39217738 (-)
ksr1a LOC106603285 other upstream 2534423 39843126 ~ 39893728 (-)

Expression


Co-expression Network