XLOC_002792


Basic Information

Item Value
gene id XLOC_002792
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 25686901 ~ 25687218 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005763
CGGCAACATGTTACATGAAAGACGACGACAATTACCAGAGAAGGCAACAATACTAGCTGTATTTtcaggtttaaaaaaaagtaaaaggcAAATGACACCAAGACTCCAAAAATGACTAACGTTATAGACACGTCGTGCTATTTTAATCTCATAACGAAGGGTACAAGGTTTACATTTCGACAGGAAGTCAGAAGATTGTCAACAATTACTCGTCAAAAGATTTTAAAGTATGCTTCAGTCTAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005763 True 243 lncRNA 0.36 2 25686901 25687218

Neighbor

gene id symbol gene type direction distance location
XLOC_002791 tiam1a coding downstream 29395 25572372 ~ 25657506 (-)
XLOC_002789 grik1a coding downstream 116254 25402463 ~ 25570647 (-)
XLOC_002790 NA coding downstream 187427 25494173 ~ 25499474 (-)
XLOC_002788 NA coding downstream 296228 25380998 ~ 25390673 (-)
XLOC_002787 tmem135 coding downstream 343380 25312337 ~ 25343521 (-)
XLOC_002793 NA coding upstream 3654 25690872 ~ 25691670 (-)
XLOC_002794 sod1 coding upstream 7177 25694395 ~ 25716953 (-)
XLOC_002795 postna coding upstream 74978 25762196 ~ 25769334 (-)
XLOC_002796 postna coding upstream 83249 25770467 ~ 25817854 (-)
XLOC_002797 ftr54 coding upstream 132778 25819996 ~ 25823258 (-)
XLOC_002779 NA non-coding downstream 834376 24833696 ~ 24852525 (-)
XLOC_002772 NA non-coding downstream 1059463 24613973 ~ 24627438 (-)
XLOC_002771 AL929315.2 non-coding downstream 1231169 24455616 ~ 24455732 (-)
XLOC_002802 NA non-coding upstream 753834 26441052 ~ 26447171 (-)
XLOC_002807 NA non-coding upstream 1149618 26836836 ~ 26872413 (-)
XLOC_002808 CR545465.2 non-coding upstream 1205349 26892567 ~ 26895076 (-)
XLOC_002809 NA non-coding upstream 1214054 26901272 ~ 26902305 (-)

Expression


Co-expression Network