Gene
RNA
| Item | Value |
|---|---|
| gene id | G885273 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 37820772 ~ 37821054 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1007313 | True | 283 | lncRNA | 0.37 | 1 | 37820772 | 37821054 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118966772 | NA | coding | upstream | 110089 | 37704049 ~ 37710683 (+) |
| agtr2 | agtr2 | coding | upstream | 302263 | 37497022 ~ 37518509 (+) |
| LOC110533821 | LOC106603323 | coding | upstream | 323226 | 37478921 ~ 37497546 (+) |
| LOC110533820 | LOC106603324 | coding | upstream | 342044 | 37419093 ~ 37478728 (+) |
| LOC110533818 | LOC106603326 | coding | upstream | 403401 | 37404347 ~ 37417371 (+) |
| LOC110533825 | LOC106603318 | coding | downstream | 55874 | 37876928 ~ 37896375 (+) |
| LOC110533830 | LOC106603314 | coding | downstream | 152285 | 37973339 ~ 37992661 (+) |
| msna | LOC106567791 | coding | downstream | 181545 | 38002599 ~ 38039709 (+) |
| LOC110533834 | LOC106603406 | coding | downstream | 238708 | 38059762 ~ 38063313 (+) |
| LOC110533835 | NA | coding | downstream | 296100 | 38117154 ~ 38117987 (+) |
| G885269 | NA | non-coding | upstream | 5943 | 37814630 ~ 37814829 (+) |
| G885265 | NA | non-coding | upstream | 13821 | 37806653 ~ 37806951 (+) |
| G885252 | NA | non-coding | upstream | 22726 | 37797806 ~ 37798046 (+) |
| G885244 | NA | non-coding | upstream | 29108 | 37791447 ~ 37791664 (+) |
| G885162 | NA | non-coding | upstream | 58725 | 37761426 ~ 37762047 (+) |
| G885320 | LOC106603317 | non-coding | downstream | 63963 | 37885017 ~ 37941204 (+) |
| G885318 | NA | non-coding | downstream | 115939 | 37936993 ~ 37959071 (+) |
| G885356 | NA | non-coding | downstream | 145272 | 37966326 ~ 37966529 (+) |
| G885379 | NA | non-coding | downstream | 179302 | 38000356 ~ 38000583 (+) |
| G883966 | NA | other | upstream | 969619 | 36849646 ~ 36851153 (+) |
| LOC110533788 | NA | other | upstream | 1019187 | 36799376 ~ 36801589 (+) |
| G883473 | om-i | other | upstream | 1525225 | 36292302 ~ 36295572 (+) |
| LOC110533748 | prps1 | other | upstream | 2134199 | 35674201 ~ 35686573 (+) |
| G882624 | NA | other | upstream | 2404534 | 35414975 ~ 35416238 (+) |
| LOC110533845 | LOC106603305 | other | downstream | 934455 | 38755443 ~ 38815017 (+) |
| G889906 | LOC106603262 | other | downstream | 3891273 | 41712327 ~ 41717292 (+) |
| G890228 | NA | other | downstream | 4257161 | 42078215 ~ 42154093 (+) |
| G891133 | NA | other | downstream | 5161628 | 42982682 ~ 43109676 (+) |
| G891188 | NA | other | downstream | 5275666 | 43096720 ~ 43097617 (+) |
