G885767


Basic Information

Item Value
gene id G885767
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 38238950 ~ 38240559 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1007856
agtaagcattgttGTATACAGTgcttgtgacaaatacaatttgatttgtattGAATTTGATATGGGTCATTCTTGAATTGGGGTGGCATTTGTGTCCCTTAGCTTTGCATCCGTGAAAAACACCTTAAAATTACAAATAATTACACATCATACATGTTTTTGTTTATATTGAACTGTTTATCAACGATAAAACATAATGCAAGTGGTTTATATTGCAAAACTTTGTGCATTGTTTCAAGTACATAGGAGAATCAAATTGGCTTGTCCCAGTagtaatcaaatcacatttatttataaaccCCTTCTTAcaccagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaaacaatgcaggtatagaagcacggtggctatgaaaaactccctagaagggacagaacctaggaagaaacctagagaggaaccaggctatgaggggtggccagtcctcttctggctgtgccaggtggagattataacagaacatggccaagatgttcaaatgttcatagatgaccagcaggtgaaataataataatcacagtggttgtcgagggtgcagcaagtcagcacctcaggagtaaatgtcagatggcttttcatagccgatcattcagagtatctcttaccgctcctgctgtctctagagagttgaaaacatagccgcaggcagaacagttggaactggagcagcagcacggtcaggtgaattggggacagcaaggagccatcaggccaggtagccctgAGGCATGGACATAggtctcaggtcctccgagagagagaaataaagaaagaaggaaagaaagagagagcatacttaaattcacacaggacaccggataagacaggagaaatactccagatataacagactggccctagcccccccgacatatatactactgcagcataaatactggaggctgagacaggaggggtcgggagacactgtggccccatccgacgatacccctggacaggggtAGAGTTGTAGTGAGTAGAGTTGAGTAGAGTTTTAATGACGTGTAGCAACTGATAATGTAACTGCCAATAATGTAATAGCTGCTAAAAATTTAATAACTTTTGCATGTATAATGTTATAAATGCTGCTATTGTCATAAATAATGTGCTAAATATGCTGAACGCATAATGTAATAACATTTTAACGTtgatgtaatgatgtaacaatgtaataACGTTGATTATTACATGGTAAAGTAGATTTTAAAAATCTATAGTGTAATAACGTAAACAAATAATGTAATAACAACCTAAAATCACACTCTTTCTTTAATGGAATGCATTATCTCACACTTGACACTTGAGGAACACTTTGTATTTGCATCCATTGCCAAAGCAGACTTGTTTGACATTGCAAACATCCAGTGTCGTCAAGAAAAAAAGACACACCTTGCAGTGATATTCCAAATTCTCACTCCTCCTTATCCCAGGATTGACCAGGCTACTGTCTCCATACAGTAGAAAAAGAGTTATTCGGCAGCGCTTGCTGCAGGCTGTGGTGAGGCAGCGCGTAGCCCCACCCACACCGCCTTAAGTGTCCCCACCAACACTaccaacaccacccc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1007856 True 1610 TUCP 0.41 1 38238950 38240559

Neighbor

gene id symbol gene type direction distance location
LOC110533836 LOC106603311 coding downstream 103219 38127426 ~ 38135731 (-)
arhgap20b LOC106603313 coding downstream 126134 38065806 ~ 38112816 (-)
mtmr8 LOC106603315 coding downstream 273144 37958407 ~ 37965806 (-)
asb12a LOC106603316 coding downstream 291070 37945479 ~ 37947880 (-)
amer1 LOC106603317 coding downstream 295898 37939057 ~ 37943052 (-)
LOC110533838 LOC106603309 coding upstream 4457 38245016 ~ 38280006 (-)
LOC110533841 LOC106603307 coding upstream 95848 38336407 ~ 38434401 (-)
LOC110533842 LOC106603306 coding upstream 304493 38545052 ~ 38617748 (-)
LOC110533851 LOC106603302 coding upstream 687910 38928469 ~ 38945732 (-)
LOC110533854 LOC106603301 coding upstream 712049 38952608 ~ 38972062 (-)
G885827 NA non-coding downstream 3176 38235418 ~ 38235774 (-)
G885761 NA non-coding downstream 63593 38117202 ~ 38175357 (-)
G885509 NA non-coding downstream 174696 38062852 ~ 38064254 (-)
G885572 NA non-coding downstream 178485 38060184 ~ 38060465 (-)
G885569 NA non-coding downstream 181967 38056730 ~ 38056983 (-)
G885840 NA non-coding upstream 52233 38292792 ~ 38293032 (-)
G885869 NA non-coding upstream 114754 38355313 ~ 38355512 (-)
G885903 NA non-coding upstream 156933 38397492 ~ 38397953 (-)
G885950 NA non-coding upstream 196877 38437436 ~ 38437731 (-)
G885999 NA non-coding upstream 228126 38468685 ~ 38469374 (-)
LOC110533823 LOC106603321 other downstream 535164 37518096 ~ 37704039 (-)
G884736 NA other downstream 920086 37316917 ~ 37318864 (-)
scn4bb LOC106603364 other downstream 1573593 36652707 ~ 36665717 (-)
G883754 NA other downstream 1846423 36391103 ~ 36392527 (-)
G883753 NA other downstream 1848036 36389997 ~ 36390914 (-)
rpl36a LOC106568029 other upstream 943139 39183698 ~ 39185578 (-)
G887329 NA other upstream 976754 39217313 ~ 39217738 (-)
ksr1a LOC106603285 other upstream 1614407 39843126 ~ 39893728 (-)
LOC110533878 LOC106603271 other upstream 2256155 40496714 ~ 40547393 (-)
G890360 LOC106603260 other upstream 3742142 41982701 ~ 41984417 (-)

Expression


Co-expression Network