G885671


Basic Information

Item Value
gene id G885671
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 38292560 ~ 38292793 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1007755
gttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtacatttatctttaattctgtgaatgacacttgcatcttttatcaatgtttattgtgagtatttctgcaaaatcaccagatgttttggaatcaaaacattactgcacgtaacgcgccaatgtaaactgagatttgatatatatatatatat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1007755 True 234 lncRNA 0.34 1 38292560 38292793

Neighbor

gene id symbol gene type direction distance location
LOC110533839 LOC106603310 coding upstream 5900 38280338 ~ 38286660 (+)
ar-beta ar-beta coding upstream 62322 38178704 ~ 38230238 (+)
LOC110533835 NA coding upstream 174573 38117154 ~ 38117987 (+)
LOC110533834 LOC106603406 coding upstream 229247 38059762 ~ 38063313 (+)
msna LOC106567791 coding upstream 252851 38002599 ~ 38039709 (+)
LOC110533840 LOC106603308 coding downstream 18028 38310821 ~ 38336289 (+)
LOC110534919 NA coding downstream 441350 38734143 ~ 38743257 (+)
LOC110533845 LOC106603305 coding downstream 462650 38755443 ~ 38815017 (+)
LOC110533846 LOC106603304 coding downstream 536825 38829618 ~ 38891890 (+)
LOC110533847 LOC106603405 coding downstream 600178 38892971 ~ 38898218 (+)
G885669 NA non-coding upstream 1537 38290726 ~ 38291023 (+)
G885668 NA non-coding upstream 1998 38290229 ~ 38290562 (+)
G885657 LOC106603309 non-coding upstream 22972 38267288 ~ 38269588 (+)
G885595 NA non-coding upstream 52280 38238734 ~ 38240280 (+)
G885673 NA non-coding downstream 6096 38298889 ~ 38352818 (+)
G885706 NA non-coding downstream 54366 38347159 ~ 38347517 (+)
G885710 NA non-coding downstream 61611 38354404 ~ 38354623 (+)
G885711 NA non-coding downstream 62648 38355441 ~ 38355642 (+)
G885712 NA non-coding downstream 63610 38356403 ~ 38356610 (+)
G883966 NA other upstream 1441407 36849646 ~ 36851153 (+)
LOC110533788 NA other upstream 1490975 36799376 ~ 36801589 (+)
G883473 om-i other upstream 1997013 36292302 ~ 36295572 (+)
LOC110533748 prps1 other upstream 2605987 35674201 ~ 35686573 (+)
G882624 NA other upstream 2876322 35414975 ~ 35416238 (+)
G889906 LOC106603262 other downstream 3419534 41712327 ~ 41717292 (+)
G890228 NA other downstream 3785422 42078215 ~ 42154093 (+)
G891133 NA other downstream 4689889 42982682 ~ 43109676 (+)
G891188 NA other downstream 4803927 43096720 ~ 43097617 (+)

Expression


Co-expression Network