G885706


Basic Information

Item Value
gene id G885706
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 38347159 ~ 38347517 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1007792
atgagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgttcaatatacgactgattgttgtcctatggacagagtctcccac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1007792 True 249 lncRNA 0.41 2 38347159 38347517

Neighbor

gene id symbol gene type direction distance location
LOC110533840 LOC106603308 coding upstream 10870 38310821 ~ 38336289 (+)
LOC110533839 LOC106603310 coding upstream 60499 38280338 ~ 38286660 (+)
ar-beta ar-beta coding upstream 116921 38178704 ~ 38230238 (+)
LOC110533835 NA coding upstream 229172 38117154 ~ 38117987 (+)
LOC110533834 LOC106603406 coding upstream 283846 38059762 ~ 38063313 (+)
LOC110534919 NA coding downstream 386626 38734143 ~ 38743257 (+)
LOC110533845 LOC106603305 coding downstream 407926 38755443 ~ 38815017 (+)
LOC110533846 LOC106603304 coding downstream 482101 38829618 ~ 38891890 (+)
LOC110533847 LOC106603405 coding downstream 545454 38892971 ~ 38898218 (+)
LOC110533848 igbp1 coding downstream 555166 38902683 ~ 38908772 (+)
G885671 NA non-coding upstream 54366 38292560 ~ 38292793 (+)
G885669 NA non-coding upstream 56136 38290726 ~ 38291023 (+)
G885668 NA non-coding upstream 56597 38290229 ~ 38290562 (+)
G885657 LOC106603309 non-coding upstream 77571 38267288 ~ 38269588 (+)
G885595 NA non-coding upstream 106879 38238734 ~ 38240280 (+)
G885710 NA non-coding downstream 6887 38354404 ~ 38354623 (+)
G885711 NA non-coding downstream 7924 38355441 ~ 38355642 (+)
G885712 NA non-coding downstream 8886 38356403 ~ 38356610 (+)
G885714 NA non-coding downstream 11307 38358824 ~ 38359026 (+)
G885924 NA non-coding downstream 79428 38426945 ~ 38427173 (+)
G883966 NA other upstream 1496006 36849646 ~ 36851153 (+)
LOC110533788 NA other upstream 1545574 36799376 ~ 36801589 (+)
G883473 om-i other upstream 2051612 36292302 ~ 36295572 (+)
LOC110533748 prps1 other upstream 2660586 35674201 ~ 35686573 (+)
G882624 NA other upstream 2930921 35414975 ~ 35416238 (+)
G889906 LOC106603262 other downstream 3364810 41712327 ~ 41717292 (+)
G890228 NA other downstream 3730698 42078215 ~ 42154093 (+)
G891133 NA other downstream 4635165 42982682 ~ 43109676 (+)
G891188 NA other downstream 4749203 43096720 ~ 43097617 (+)

Expression


Co-expression Network