G885712


Basic Information

Item Value
gene id G885712
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 38356403 ~ 38356610 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1007798
tttgaatgcaactcagcattctttatcctccaaacacgacgagttgagtttttaccaaaaagttatattttggtttcatctgaccatatgacattcttccaatcttcttctggatcatcaaaatgctctctagaaaacttcagacgagcctggacatgtactggcttaagcaggggaacacgtctggcactgcaggatttgagtccct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1007798 True 208 lncRNA 0.41 1 38356403 38356610

Neighbor

gene id symbol gene type direction distance location
LOC110533840 LOC106603308 coding upstream 20114 38310821 ~ 38336289 (+)
LOC110533839 LOC106603310 coding upstream 69743 38280338 ~ 38286660 (+)
ar-beta ar-beta coding upstream 126165 38178704 ~ 38230238 (+)
LOC110533835 NA coding upstream 238416 38117154 ~ 38117987 (+)
LOC110533834 LOC106603406 coding upstream 293090 38059762 ~ 38063313 (+)
LOC110534919 NA coding downstream 377533 38734143 ~ 38743257 (+)
LOC110533845 LOC106603305 coding downstream 398833 38755443 ~ 38815017 (+)
LOC110533846 LOC106603304 coding downstream 473008 38829618 ~ 38891890 (+)
LOC110533847 LOC106603405 coding downstream 536361 38892971 ~ 38898218 (+)
LOC110533848 igbp1 coding downstream 546073 38902683 ~ 38908772 (+)
G885711 NA non-coding upstream 761 38355441 ~ 38355642 (+)
G885710 NA non-coding upstream 1780 38354404 ~ 38354623 (+)
G885673 NA non-coding upstream 3585 38298889 ~ 38352818 (+)
G885706 NA non-coding upstream 8886 38347159 ~ 38347517 (+)
G885671 NA non-coding upstream 63610 38292560 ~ 38292793 (+)
G885714 NA non-coding downstream 2214 38358824 ~ 38359026 (+)
G885924 NA non-coding downstream 70335 38426945 ~ 38427173 (+)
G885964 NA non-coding downstream 89101 38445711 ~ 38446437 (+)
G885995 NA non-coding downstream 110718 38467328 ~ 38467576 (+)
G886002 NA non-coding downstream 113405 38470015 ~ 38470217 (+)
G883966 NA other upstream 1505250 36849646 ~ 36851153 (+)
LOC110533788 NA other upstream 1554818 36799376 ~ 36801589 (+)
G883473 om-i other upstream 2060856 36292302 ~ 36295572 (+)
LOC110533748 prps1 other upstream 2669830 35674201 ~ 35686573 (+)
G882624 NA other upstream 2940165 35414975 ~ 35416238 (+)
G889906 LOC106603262 other downstream 3355717 41712327 ~ 41717292 (+)
G890228 NA other downstream 3721605 42078215 ~ 42154093 (+)
G891133 NA other downstream 4626072 42982682 ~ 43109676 (+)
G891188 NA other downstream 4740110 43096720 ~ 43097617 (+)

Expression


Co-expression Network