Gene
RNA
| Item | Value |
|---|---|
| gene id | G885903 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 38397492 ~ 38397953 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1008006 | True | 362 | lncRNA | 0.38 | 4 | 38397492 | 38397953 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533838 | LOC106603309 | coding | downstream | 117486 | 38245016 ~ 38280006 (-) |
| LOC110533836 | LOC106603311 | coding | downstream | 261761 | 38127426 ~ 38135731 (-) |
| arhgap20b | LOC106603313 | coding | downstream | 284676 | 38065806 ~ 38112816 (-) |
| mtmr8 | LOC106603315 | coding | downstream | 431686 | 37958407 ~ 37965806 (-) |
| asb12a | LOC106603316 | coding | downstream | 449612 | 37945479 ~ 37947880 (-) |
| LOC110533842 | LOC106603306 | coding | upstream | 147099 | 38545052 ~ 38617748 (-) |
| LOC110533851 | LOC106603302 | coding | upstream | 530516 | 38928469 ~ 38945732 (-) |
| LOC110533854 | LOC106603301 | coding | upstream | 554655 | 38952608 ~ 38972062 (-) |
| LOC110533855 | LOC106603300 | coding | upstream | 586302 | 38984255 ~ 39000731 (-) |
| radx | cssa04hxorf57 | coding | upstream | 608381 | 39006334 ~ 39016120 (-) |
| G885869 | NA | non-coding | downstream | 41980 | 38355313 ~ 38355512 (-) |
| G885840 | NA | non-coding | downstream | 104460 | 38292792 ~ 38293032 (-) |
| G885827 | NA | non-coding | downstream | 161718 | 38235418 ~ 38235774 (-) |
| G885761 | NA | non-coding | downstream | 222135 | 38117202 ~ 38175357 (-) |
| G885509 | NA | non-coding | downstream | 333238 | 38062852 ~ 38064254 (-) |
| G885950 | NA | non-coding | upstream | 39483 | 38437436 ~ 38437731 (-) |
| G885999 | NA | non-coding | upstream | 70732 | 38468685 ~ 38469374 (-) |
| G886035 | NA | non-coding | upstream | 92153 | 38490106 ~ 38490384 (-) |
| G886049 | NA | non-coding | upstream | 99148 | 38497101 ~ 38497311 (-) |
| G886054 | NA | non-coding | upstream | 104384 | 38502337 ~ 38502642 (-) |
| G885767 | NA | other | downstream | 156933 | 38238950 ~ 38240559 (-) |
| LOC110533823 | LOC106603321 | other | downstream | 693706 | 37518096 ~ 37704039 (-) |
| G884736 | NA | other | downstream | 1078628 | 37316917 ~ 37318864 (-) |
| scn4bb | LOC106603364 | other | downstream | 1732135 | 36652707 ~ 36665717 (-) |
| G883754 | NA | other | downstream | 2004965 | 36391103 ~ 36392527 (-) |
| rpl36a | LOC106568029 | other | upstream | 785745 | 39183698 ~ 39185578 (-) |
| G887329 | NA | other | upstream | 819360 | 39217313 ~ 39217738 (-) |
| ksr1a | LOC106603285 | other | upstream | 1457013 | 39843126 ~ 39893728 (-) |
| LOC110533878 | LOC106603271 | other | upstream | 2098761 | 40496714 ~ 40547393 (-) |
| G890360 | LOC106603260 | other | upstream | 3584748 | 41982701 ~ 41984417 (-) |
