G886018


Basic Information

Item Value
gene id G886018
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 38479239 ~ 38479489 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1008128
atataacccttggttcattccagacttgactgccattgaccagcacaaaaacatcctgtggcgcacTGCACTGGCTTCAAATAGTCccagcgatatgcaacttttcagtgaAGTCCGGAaacaatatacacagtcagttaggaaagcaatgGACAGCTTTTTTAAATAGAAATTAGCATCCTGCAGCACCAATTctaaaaggttttgggacactgtccagtctatggagaataagagcacctcctctcagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1008128 True 251 lncRNA 0.43 1 38479239 38479489

Neighbor

gene id symbol gene type direction distance location
LOC110533840 LOC106603308 coding upstream 142950 38310821 ~ 38336289 (+)
LOC110533839 LOC106603310 coding upstream 192579 38280338 ~ 38286660 (+)
ar-beta ar-beta coding upstream 249001 38178704 ~ 38230238 (+)
LOC110533835 NA coding upstream 361252 38117154 ~ 38117987 (+)
LOC110533834 LOC106603406 coding upstream 415926 38059762 ~ 38063313 (+)
LOC110534919 NA coding downstream 254654 38734143 ~ 38743257 (+)
LOC110533845 LOC106603305 coding downstream 275954 38755443 ~ 38815017 (+)
LOC110533846 LOC106603304 coding downstream 350129 38829618 ~ 38891890 (+)
LOC110533847 LOC106603405 coding downstream 413482 38892971 ~ 38898218 (+)
LOC110533848 igbp1 coding downstream 423194 38902683 ~ 38908772 (+)
G886008 NA non-coding upstream 7305 38471727 ~ 38471934 (+)
G886002 NA non-coding upstream 9022 38470015 ~ 38470217 (+)
G885995 NA non-coding upstream 11663 38467328 ~ 38467576 (+)
G885964 NA non-coding upstream 32802 38445711 ~ 38446437 (+)
G885924 NA non-coding upstream 52066 38426945 ~ 38427173 (+)
G886026 NA non-coding downstream 4277 38483766 ~ 38483970 (+)
G886027 NA non-coding downstream 4845 38484334 ~ 38484567 (+)
G886032 NA non-coding downstream 8447 38487936 ~ 38488321 (+)
G886036 NA non-coding downstream 11657 38491146 ~ 38491360 (+)
G886043 NA non-coding downstream 16008 38495497 ~ 38495704 (+)
G883966 NA other upstream 1628086 36849646 ~ 36851153 (+)
LOC110533788 NA other upstream 1677654 36799376 ~ 36801589 (+)
G883473 om-i other upstream 2183692 36292302 ~ 36295572 (+)
LOC110533748 prps1 other upstream 2792666 35674201 ~ 35686573 (+)
G882624 NA other upstream 3063001 35414975 ~ 35416238 (+)
G889906 LOC106603262 other downstream 3232838 41712327 ~ 41717292 (+)
G890228 NA other downstream 3598726 42078215 ~ 42154093 (+)
G891133 NA other downstream 4503193 42982682 ~ 43109676 (+)
G891188 NA other downstream 4617231 43096720 ~ 43097617 (+)

Expression


Co-expression Network