G886032


Basic Information

Item Value
gene id G886032
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 38487936 ~ 38488321 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1008142
gcaataatctgagacggcgcacAGAAAATTaatcaaattagccgccatgttggagtcaacagaaaccagaaattacatgataaatattcccttacctttgatgatcttcatcagaatgcactcccaggaattgcagttccacaataaatgcttgatttgttcgataatgtccattatttatgtccaagtagctgctTTTGTTAGCGTTAGgtacacatatccaaacgctTGTGCGTTTGGACAAAAACtttggacaaaaacttcaaaaagttatattacaggtcgaagaaacatttcaaactacagtgccttgcaaaagtattcggcccccttgaactttgcgaccttatgccacatttcaggcttcaaacataaagatataaaac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1008142 True 386 lncRNA 0.38 1 38487936 38488321

Neighbor

gene id symbol gene type direction distance location
LOC110533840 LOC106603308 coding upstream 151647 38310821 ~ 38336289 (+)
LOC110533839 LOC106603310 coding upstream 201276 38280338 ~ 38286660 (+)
ar-beta ar-beta coding upstream 257698 38178704 ~ 38230238 (+)
LOC110533835 NA coding upstream 369949 38117154 ~ 38117987 (+)
LOC110533834 LOC106603406 coding upstream 424623 38059762 ~ 38063313 (+)
LOC110534919 NA coding downstream 245822 38734143 ~ 38743257 (+)
LOC110533845 LOC106603305 coding downstream 267122 38755443 ~ 38815017 (+)
LOC110533846 LOC106603304 coding downstream 341297 38829618 ~ 38891890 (+)
LOC110533847 LOC106603405 coding downstream 404650 38892971 ~ 38898218 (+)
LOC110533848 igbp1 coding downstream 414362 38902683 ~ 38908772 (+)
G886027 NA non-coding upstream 3369 38484334 ~ 38484567 (+)
G886026 NA non-coding upstream 3966 38483766 ~ 38483970 (+)
G886018 NA non-coding upstream 8447 38479239 ~ 38479489 (+)
G886008 NA non-coding upstream 16002 38471727 ~ 38471934 (+)
G886002 NA non-coding upstream 17719 38470015 ~ 38470217 (+)
G886036 NA non-coding downstream 2825 38491146 ~ 38491360 (+)
G886043 NA non-coding downstream 7176 38495497 ~ 38495704 (+)
G886254 NA non-coding downstream 147295 38635616 ~ 38635926 (+)
G886256 NA non-coding downstream 148537 38636858 ~ 38637078 (+)
G886277 NA non-coding downstream 160724 38649045 ~ 38649578 (+)
G883966 NA other upstream 1636783 36849646 ~ 36851153 (+)
LOC110533788 NA other upstream 1686351 36799376 ~ 36801589 (+)
G883473 om-i other upstream 2192389 36292302 ~ 36295572 (+)
LOC110533748 prps1 other upstream 2801363 35674201 ~ 35686573 (+)
G882624 NA other upstream 3071698 35414975 ~ 35416238 (+)
G889906 LOC106603262 other downstream 3224006 41712327 ~ 41717292 (+)
G890228 NA other downstream 3589894 42078215 ~ 42154093 (+)
G891133 NA other downstream 4494361 42982682 ~ 43109676 (+)
G891188 NA other downstream 4608399 43096720 ~ 43097617 (+)

Expression


Co-expression Network