G886036


Basic Information

Item Value
gene id G886036
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 38491146 ~ 38491360 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1008146
GGGTATGGTGCcctatcagaggcagctgtctatcgttgtctctgattggggaatcatacttaggcagcctttattccaccttagtttgtgggatcttgtttttgtactgtTGCTTTCAAGCCCTACAGAACTGTGCGTTTCGTTTTGTATTTGTTAATTTTTTTCGGTGTCATCAATAAAAGAaagatgtacgcctaccacgctgcaccttggtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1008146 True 215 lncRNA 0.43 1 38491146 38491360

Neighbor

gene id symbol gene type direction distance location
LOC110533840 LOC106603308 coding upstream 154857 38310821 ~ 38336289 (+)
LOC110533839 LOC106603310 coding upstream 204486 38280338 ~ 38286660 (+)
ar-beta ar-beta coding upstream 260908 38178704 ~ 38230238 (+)
LOC110533835 NA coding upstream 373159 38117154 ~ 38117987 (+)
LOC110533834 LOC106603406 coding upstream 427833 38059762 ~ 38063313 (+)
LOC110534919 NA coding downstream 242783 38734143 ~ 38743257 (+)
LOC110533845 LOC106603305 coding downstream 264083 38755443 ~ 38815017 (+)
LOC110533846 LOC106603304 coding downstream 338258 38829618 ~ 38891890 (+)
LOC110533847 LOC106603405 coding downstream 401611 38892971 ~ 38898218 (+)
LOC110533848 igbp1 coding downstream 411323 38902683 ~ 38908772 (+)
G886032 NA non-coding upstream 2825 38487936 ~ 38488321 (+)
G886027 NA non-coding upstream 6579 38484334 ~ 38484567 (+)
G886026 NA non-coding upstream 7176 38483766 ~ 38483970 (+)
G886018 NA non-coding upstream 11657 38479239 ~ 38479489 (+)
G886008 NA non-coding upstream 19212 38471727 ~ 38471934 (+)
G886043 NA non-coding downstream 4137 38495497 ~ 38495704 (+)
G886254 NA non-coding downstream 144256 38635616 ~ 38635926 (+)
G886256 NA non-coding downstream 145498 38636858 ~ 38637078 (+)
G886277 NA non-coding downstream 157685 38649045 ~ 38649578 (+)
G886285 NA non-coding downstream 162178 38653538 ~ 38653895 (+)
G883966 NA other upstream 1639993 36849646 ~ 36851153 (+)
LOC110533788 NA other upstream 1689561 36799376 ~ 36801589 (+)
G883473 om-i other upstream 2195599 36292302 ~ 36295572 (+)
LOC110533748 prps1 other upstream 2804573 35674201 ~ 35686573 (+)
G882624 NA other upstream 3074908 35414975 ~ 35416238 (+)
G889906 LOC106603262 other downstream 3220967 41712327 ~ 41717292 (+)
G890228 NA other downstream 3586855 42078215 ~ 42154093 (+)
G891133 NA other downstream 4491322 42982682 ~ 43109676 (+)
G891188 NA other downstream 4605360 43096720 ~ 43097617 (+)

Expression


Co-expression Network