Gene
RNA
| Item | Value |
|---|---|
| gene id | G886054 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 38502337 ~ 38502642 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1008164 | True | 306 | lncRNA | 0.35 | 1 | 38502337 | 38502642 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533841 | LOC106603307 | coding | downstream | 67936 | 38336407 ~ 38434401 (-) |
| LOC110533838 | LOC106603309 | coding | downstream | 222331 | 38245016 ~ 38280006 (-) |
| LOC110533836 | LOC106603311 | coding | downstream | 366606 | 38127426 ~ 38135731 (-) |
| arhgap20b | LOC106603313 | coding | downstream | 389521 | 38065806 ~ 38112816 (-) |
| mtmr8 | LOC106603315 | coding | downstream | 536531 | 37958407 ~ 37965806 (-) |
| LOC110533842 | LOC106603306 | coding | upstream | 42410 | 38545052 ~ 38617748 (-) |
| LOC110533851 | LOC106603302 | coding | upstream | 425827 | 38928469 ~ 38945732 (-) |
| LOC110533854 | LOC106603301 | coding | upstream | 449966 | 38952608 ~ 38972062 (-) |
| LOC110533855 | LOC106603300 | coding | upstream | 481613 | 38984255 ~ 39000731 (-) |
| radx | cssa04hxorf57 | coding | upstream | 503692 | 39006334 ~ 39016120 (-) |
| G886049 | NA | non-coding | downstream | 5026 | 38497101 ~ 38497311 (-) |
| G886035 | NA | non-coding | downstream | 11953 | 38490106 ~ 38490384 (-) |
| G885999 | NA | non-coding | downstream | 32963 | 38468685 ~ 38469374 (-) |
| G885950 | NA | non-coding | downstream | 64606 | 38437436 ~ 38437731 (-) |
| G885903 | NA | non-coding | downstream | 104384 | 38397492 ~ 38397953 (-) |
| G886268 | NA | non-coding | upstream | 140559 | 38643201 ~ 38643429 (-) |
| G886322 | NA | non-coding | upstream | 175673 | 38678315 ~ 38678544 (-) |
| G886327 | NA | non-coding | upstream | 181053 | 38683695 ~ 38684137 (-) |
| G886342 | NA | non-coding | upstream | 191514 | 38694156 ~ 38695032 (-) |
| G886366 | NA | non-coding | upstream | 208759 | 38711401 ~ 38711640 (-) |
| G885767 | NA | other | downstream | 261778 | 38238950 ~ 38240559 (-) |
| LOC110533823 | LOC106603321 | other | downstream | 798551 | 37518096 ~ 37704039 (-) |
| G884736 | NA | other | downstream | 1183473 | 37316917 ~ 37318864 (-) |
| scn4bb | LOC106603364 | other | downstream | 1836980 | 36652707 ~ 36665717 (-) |
| G883754 | NA | other | downstream | 2109810 | 36391103 ~ 36392527 (-) |
| rpl36a | LOC106568029 | other | upstream | 681056 | 39183698 ~ 39185578 (-) |
| G887329 | NA | other | upstream | 714671 | 39217313 ~ 39217738 (-) |
| ksr1a | LOC106603285 | other | upstream | 1352324 | 39843126 ~ 39893728 (-) |
| LOC110533878 | LOC106603271 | other | upstream | 1994072 | 40496714 ~ 40547393 (-) |
| G890360 | LOC106603260 | other | upstream | 3480059 | 41982701 ~ 41984417 (-) |
