Gene
RNA
| Item | Value |
|---|---|
| gene id | G886322 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 38678315 ~ 38678544 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106570150 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1008439 | True | 230 | lncRNA | 0.38 | 1 | 38678315 | 38678544 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533842 | LOC106603306 | coding | downstream | 60567 | 38545052 ~ 38617748 (-) |
| LOC110533841 | LOC106603307 | coding | downstream | 243914 | 38336407 ~ 38434401 (-) |
| LOC110533838 | LOC106603309 | coding | downstream | 398309 | 38245016 ~ 38280006 (-) |
| LOC110533836 | LOC106603311 | coding | downstream | 542584 | 38127426 ~ 38135731 (-) |
| arhgap20b | LOC106603313 | coding | downstream | 565499 | 38065806 ~ 38112816 (-) |
| LOC110533851 | LOC106603302 | coding | upstream | 249925 | 38928469 ~ 38945732 (-) |
| LOC110533854 | LOC106603301 | coding | upstream | 274064 | 38952608 ~ 38972062 (-) |
| LOC110533855 | LOC106603300 | coding | upstream | 305711 | 38984255 ~ 39000731 (-) |
| radx | cssa04hxorf57 | coding | upstream | 327790 | 39006334 ~ 39016120 (-) |
| LOC110533857 | LOC106603298 | coding | upstream | 345699 | 39024243 ~ 39096076 (-) |
| G886268 | NA | non-coding | downstream | 34886 | 38643201 ~ 38643429 (-) |
| G886054 | NA | non-coding | downstream | 175673 | 38502337 ~ 38502642 (-) |
| G886049 | NA | non-coding | downstream | 181004 | 38497101 ~ 38497311 (-) |
| G886035 | NA | non-coding | downstream | 187931 | 38490106 ~ 38490384 (-) |
| G885999 | NA | non-coding | downstream | 208941 | 38468685 ~ 38469374 (-) |
| G886327 | NA | non-coding | upstream | 5151 | 38683695 ~ 38684137 (-) |
| G886342 | NA | non-coding | upstream | 15612 | 38694156 ~ 38695032 (-) |
| G886366 | NA | non-coding | upstream | 32857 | 38711401 ~ 38711640 (-) |
| G886729 | LOC106567779 | non-coding | upstream | 133344 | 38811888 ~ 38814988 (-) |
| G886764 | NA | non-coding | upstream | 180225 | 38858769 ~ 38880769 (-) |
| G885767 | NA | other | downstream | 437756 | 38238950 ~ 38240559 (-) |
| LOC110533823 | LOC106603321 | other | downstream | 974529 | 37518096 ~ 37704039 (-) |
| G884736 | NA | other | downstream | 1359451 | 37316917 ~ 37318864 (-) |
| scn4bb | LOC106603364 | other | downstream | 2012958 | 36652707 ~ 36665717 (-) |
| G883754 | NA | other | downstream | 2285788 | 36391103 ~ 36392527 (-) |
| rpl36a | LOC106568029 | other | upstream | 505154 | 39183698 ~ 39185578 (-) |
| G887329 | NA | other | upstream | 538769 | 39217313 ~ 39217738 (-) |
| ksr1a | LOC106603285 | other | upstream | 1176422 | 39843126 ~ 39893728 (-) |
| LOC110533878 | LOC106603271 | other | upstream | 1818170 | 40496714 ~ 40547393 (-) |
| G890360 | LOC106603260 | other | upstream | 3304157 | 41982701 ~ 41984417 (-) |
