G886323


Basic Information

Item Value
gene id G886323
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 38678609 ~ 38678834 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1008440
TGCTGCCCCTGTAAGCCCGTTGGTGTCTGAGAATGAGGGCGAGGCTAAAGCTCCAGCCACGTTGCCCCGTTTTGATCCACTCTCCCCACTGTCAACCGGTGATGCCATGAGGGATGTCCGTTCAATACAGTTTCAACTGGAGGCGGAAGAGAGAGCCCAAATTAGGCGGGAGACTCTCCAGTTGGAGATGTGTAAAATTGAGGCAGAAAAAGAACGAGAACAGCGG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106585798

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1008440 True 226 lncRNA 0.54 1 38678609 38678834

Neighbor

gene id symbol gene type direction distance location
LOC110533840 LOC106603308 coding upstream 342320 38310821 ~ 38336289 (+)
LOC110533839 LOC106603310 coding upstream 391949 38280338 ~ 38286660 (+)
ar-beta ar-beta coding upstream 448371 38178704 ~ 38230238 (+)
LOC110533835 NA coding upstream 560622 38117154 ~ 38117987 (+)
LOC110533834 LOC106603406 coding upstream 615296 38059762 ~ 38063313 (+)
LOC110534919 NA coding downstream 55309 38734143 ~ 38743257 (+)
LOC110533845 LOC106603305 coding downstream 76609 38755443 ~ 38815017 (+)
LOC110533846 LOC106603304 coding downstream 150784 38829618 ~ 38891890 (+)
LOC110533847 LOC106603405 coding downstream 214137 38892971 ~ 38898218 (+)
LOC110533848 igbp1 coding downstream 223849 38902683 ~ 38908772 (+)
G886285 NA non-coding upstream 24714 38653538 ~ 38653895 (+)
G886277 NA non-coding upstream 29031 38649045 ~ 38649578 (+)
G886256 NA non-coding upstream 41531 38636858 ~ 38637078 (+)
G886254 NA non-coding upstream 42683 38635616 ~ 38635926 (+)
G886043 NA non-coding upstream 182905 38495497 ~ 38495704 (+)
G886324 NA non-coding downstream 254 38679088 ~ 38679478 (+)
G886337 NA non-coding downstream 12464 38691298 ~ 38691575 (+)
G886341 NA non-coding downstream 15515 38694349 ~ 38694864 (+)
G886345 NA non-coding downstream 21598 38700432 ~ 38700666 (+)
G886365 NA non-coding downstream 32052 38710886 ~ 38711094 (+)
G883966 NA other upstream 1827456 36849646 ~ 36851153 (+)
LOC110533788 NA other upstream 1877024 36799376 ~ 36801589 (+)
G883473 om-i other upstream 2383062 36292302 ~ 36295572 (+)
LOC110533748 prps1 other upstream 2992036 35674201 ~ 35686573 (+)
G882624 NA other upstream 3262371 35414975 ~ 35416238 (+)
G889906 LOC106603262 other downstream 3033493 41712327 ~ 41717292 (+)
G890228 NA other downstream 3399381 42078215 ~ 42154093 (+)
G891133 NA other downstream 4303848 42982682 ~ 43109676 (+)
G891188 NA other downstream 4417886 43096720 ~ 43097617 (+)

Expression


Co-expression Network