Gene
RNA
| Item | Value |
|---|---|
| gene id | G886839 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 39005186 ~ 39022000 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1009007 | True | 286 | lncRNA | 0.36 | 2 | 39005186 | 39022000 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533855 | LOC106603300 | coding | downstream | 4455 | 38984255 ~ 39000731 (-) |
| LOC110533854 | LOC106603301 | coding | downstream | 33124 | 38952608 ~ 38972062 (-) |
| LOC110533851 | LOC106603302 | coding | downstream | 59454 | 38928469 ~ 38945732 (-) |
| LOC110533842 | LOC106603306 | coding | downstream | 387438 | 38545052 ~ 38617748 (-) |
| LOC110533841 | LOC106603307 | coding | downstream | 570785 | 38336407 ~ 38434401 (-) |
| LOC110533857 | LOC106603298 | coding | upstream | 2243 | 39024243 ~ 39096076 (-) |
| LOC110534920 | LOC106603297 | coding | upstream | 98154 | 39120154 ~ 39121838 (-) |
| rpl36a | LOC106568029 | coding | upstream | 161759 | 39183698 ~ 39185578 (-) |
| LOC110533862 | NA | coding | upstream | 175965 | 39197965 ~ 39199921 (-) |
| LOC110533864 | LOC106603292 | coding | upstream | 288186 | 39310186 ~ 39634685 (-) |
| G886799 | cxb1 | non-coding | downstream | 85251 | 38917578 ~ 38919935 (-) |
| G886744 | NA | non-coding | downstream | 96424 | 38906460 ~ 38908762 (-) |
| G886764 | NA | non-coding | downstream | 124417 | 38858769 ~ 38880769 (-) |
| G886729 | LOC106567779 | non-coding | downstream | 190198 | 38811888 ~ 38814988 (-) |
| G886366 | NA | non-coding | downstream | 293546 | 38711401 ~ 38711640 (-) |
| G886892 | NA | non-coding | upstream | 107115 | 39129115 ~ 39129417 (-) |
| G886895 | NA | non-coding | upstream | 115734 | 39137734 ~ 39138012 (-) |
| G886929 | NA | non-coding | upstream | 165124 | 39187124 ~ 39187343 (-) |
| G886887 | NA | non-coding | upstream | 172095 | 39194095 ~ 39194480 (-) |
| G886936 | NA | non-coding | upstream | 172631 | 39194631 ~ 39194846 (-) |
| G885767 | NA | other | downstream | 764627 | 38238950 ~ 38240559 (-) |
| LOC110533823 | LOC106603321 | other | downstream | 1301400 | 37518096 ~ 37704039 (-) |
| G884736 | NA | other | downstream | 1686322 | 37316917 ~ 37318864 (-) |
| scn4bb | LOC106603364 | other | downstream | 2339829 | 36652707 ~ 36665717 (-) |
| G883754 | NA | other | downstream | 2612659 | 36391103 ~ 36392527 (-) |
| G887329 | NA | other | upstream | 195313 | 39217313 ~ 39217738 (-) |
| ksr1a | LOC106603285 | other | upstream | 832966 | 39843126 ~ 39893728 (-) |
| LOC110533878 | LOC106603271 | other | upstream | 1474714 | 40496714 ~ 40547393 (-) |
| G890360 | LOC106603260 | other | upstream | 2960701 | 41982701 ~ 41984417 (-) |
