Gene
RNA
| Item | Value |
|---|---|
| gene id | G886938 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 39195726 ~ 39195925 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1009113 | True | 200 | lncRNA | 0.34 | 1 | 39195726 | 39195925 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rpl36a | LOC106568029 | coding | downstream | 10148 | 39183698 ~ 39185578 (-) |
| LOC110534920 | LOC106603297 | coding | downstream | 73888 | 39120154 ~ 39121838 (-) |
| LOC110533857 | LOC106603298 | coding | downstream | 99650 | 39024243 ~ 39096076 (-) |
| radx | cssa04hxorf57 | coding | downstream | 179606 | 39006334 ~ 39016120 (-) |
| LOC110533855 | LOC106603300 | coding | downstream | 194995 | 38984255 ~ 39000731 (-) |
| LOC110533862 | NA | coding | upstream | 2040 | 39197965 ~ 39199921 (-) |
| LOC110533864 | LOC106603292 | coding | upstream | 114261 | 39310186 ~ 39634685 (-) |
| LOC110533865 | LOC106603290 | coding | upstream | 446063 | 39641988 ~ 39671377 (-) |
| LOC110533866 | LOC106603288 | coding | upstream | 475648 | 39671573 ~ 39748431 (-) |
| LOC110533869 | LOC106603287 | coding | upstream | 575365 | 39771290 ~ 39775768 (-) |
| G886936 | NA | non-coding | downstream | 880 | 39194631 ~ 39194846 (-) |
| G886887 | NA | non-coding | downstream | 1246 | 39194095 ~ 39194480 (-) |
| G886929 | NA | non-coding | downstream | 8383 | 39187124 ~ 39187343 (-) |
| G886895 | NA | non-coding | downstream | 57714 | 39137734 ~ 39138012 (-) |
| G886892 | NA | non-coding | downstream | 66309 | 39129115 ~ 39129417 (-) |
| G886940 | NA | non-coding | upstream | 1273 | 39197198 ~ 39197557 (-) |
| G886946 | NA | non-coding | upstream | 5106 | 39201031 ~ 39201263 (-) |
| G886947 | NA | non-coding | upstream | 5531 | 39201456 ~ 39201736 (-) |
| G886950 | LOC100194703 | non-coding | upstream | 7383 | 39203308 ~ 39203563 (-) |
| G887324 | NA | non-coding | upstream | 13429 | 39209354 ~ 39209775 (-) |
| G885767 | NA | other | downstream | 955167 | 38238950 ~ 38240559 (-) |
| LOC110533823 | LOC106603321 | other | downstream | 1491940 | 37518096 ~ 37704039 (-) |
| G884736 | NA | other | downstream | 1876862 | 37316917 ~ 37318864 (-) |
| scn4bb | LOC106603364 | other | downstream | 2530369 | 36652707 ~ 36665717 (-) |
| G887329 | NA | other | upstream | 21388 | 39217313 ~ 39217738 (-) |
| ksr1a | LOC106603285 | other | upstream | 659041 | 39843126 ~ 39893728 (-) |
| LOC110533878 | LOC106603271 | other | upstream | 1300789 | 40496714 ~ 40547393 (-) |
| G890360 | LOC106603260 | other | upstream | 2786776 | 41982701 ~ 41984417 (-) |
| G890385 | LOC100136012 | other | upstream | 2791786 | 41987711 ~ 41989801 (-) |
