G886965


Basic Information

Item Value
gene id G886965
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 39217646 ~ 39217856 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1009140
gttgatttcttcaaaccaagctgcttacctattgcagattcagtcatcccagcctggtgcaggtctacaattttgtttctggtgtcctttgacagctctttggtcttggccatagtggagtttggagtgtgactgtttgaggttgtggacaggtgtcttttatactgataataagttcaaacaggtgccattaatacaggtaacgagtgga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1009140 True 211 lncRNA 0.43 1 39217646 39217856

Neighbor

gene id symbol gene type direction distance location
LOC110533860 LOC106568029 coding upstream 32589 39157811 ~ 39185062 (+)
LOC110533859 LOC106603296 coding upstream 69962 39143458 ~ 39147684 (+)
LOC110533852 LOC106603303 coding upstream 289386 38922342 ~ 38928260 (+)
LOC110533849 cxb1 coding upstream 297533 38915893 ~ 38920113 (+)
LOC110533848 igbp1 coding upstream 308874 38902683 ~ 38908772 (+)
LOC110533863 LOC106603293 coding downstream 9174 39227030 ~ 39234212 (+)
LOC110533868 NA coding downstream 486662 39704518 ~ 39706579 (+)
LOC110533867 LOC106603289 coding downstream 489479 39707335 ~ 39710492 (+)
LOC118966774 NA coding downstream 569845 39787701 ~ 39789535 (+)
LOC110533109 LOC106603283 coding downstream 757314 39975170 ~ 39977790 (+)
G886964 NA non-coding upstream 29 39217395 ~ 39217617 (+)
G886961 NA non-coding upstream 4522 39212775 ~ 39213124 (+)
G886960 NA non-coding upstream 4942 39212448 ~ 39212704 (+)
G886959 NA non-coding upstream 5615 39211782 ~ 39212031 (+)
G886948 NA non-coding upstream 14941 39202473 ~ 39202705 (+)
G887040 NA non-coding downstream 116085 39333941 ~ 39334776 (+)
G887060 LOC106603292 non-coding downstream 146764 39364620 ~ 39520376 (+)
G887163 NA non-coding downstream 289831 39507687 ~ 39508758 (+)
G887248 NA non-coding downstream 419715 39637571 ~ 39637774 (+)
G887250 NA non-coding downstream 423269 39641125 ~ 39641335 (+)
LOC110533845 LOC106603305 other upstream 405507 38755443 ~ 38815017 (+)
G883966 NA other upstream 2366493 36849646 ~ 36851153 (+)
LOC110533788 NA other upstream 2416061 36799376 ~ 36801589 (+)
G883473 om-i other upstream 2922099 36292302 ~ 36295572 (+)
LOC110533748 prps1 other upstream 3531073 35674201 ~ 35686573 (+)
G889906 LOC106603262 other downstream 2494471 41712327 ~ 41717292 (+)
G890228 NA other downstream 2860359 42078215 ~ 42154093 (+)
G891133 NA other downstream 3764826 42982682 ~ 43109676 (+)
G891188 NA other downstream 3878864 43096720 ~ 43097617 (+)
G891741 NA other downstream 4316460 43534316 ~ 43600230 (+)

Expression


Co-expression Network