Gene
RNA
| Item | Value |
|---|---|
| gene id | G887040 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 39333941 ~ 39334776 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1009219 | True | 812 | lncRNA | 0.50 | 2 | 39333941 | 39334776 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533863 | LOC106603293 | coding | upstream | 99729 | 39227030 ~ 39234212 (+) |
| LOC110533860 | LOC106568029 | coding | upstream | 148884 | 39157811 ~ 39185062 (+) |
| LOC110533859 | LOC106603296 | coding | upstream | 186257 | 39143458 ~ 39147684 (+) |
| LOC110533852 | LOC106603303 | coding | upstream | 405681 | 38922342 ~ 38928260 (+) |
| LOC110533849 | cxb1 | coding | upstream | 413828 | 38915893 ~ 38920113 (+) |
| LOC110533868 | NA | coding | downstream | 369742 | 39704518 ~ 39706579 (+) |
| LOC110533867 | LOC106603289 | coding | downstream | 372559 | 39707335 ~ 39710492 (+) |
| LOC118966774 | NA | coding | downstream | 452925 | 39787701 ~ 39789535 (+) |
| LOC110533109 | LOC106603283 | coding | downstream | 640394 | 39975170 ~ 39977790 (+) |
| LOC110533873 | LOC106603279 | coding | downstream | 648266 | 39983042 ~ 40090027 (+) |
| G886965 | NA | non-coding | upstream | 116085 | 39217646 ~ 39217856 (+) |
| G886964 | NA | non-coding | upstream | 116324 | 39217395 ~ 39217617 (+) |
| G886961 | NA | non-coding | upstream | 120817 | 39212775 ~ 39213124 (+) |
| G886960 | NA | non-coding | upstream | 121237 | 39212448 ~ 39212704 (+) |
| G886959 | NA | non-coding | upstream | 121910 | 39211782 ~ 39212031 (+) |
| G887060 | LOC106603292 | non-coding | downstream | 29844 | 39364620 ~ 39520376 (+) |
| G887163 | NA | non-coding | downstream | 172911 | 39507687 ~ 39508758 (+) |
| G887248 | NA | non-coding | downstream | 302795 | 39637571 ~ 39637774 (+) |
| G887250 | NA | non-coding | downstream | 306349 | 39641125 ~ 39641335 (+) |
| G887274 | NA | non-coding | downstream | 336931 | 39671707 ~ 39676278 (+) |
| LOC110533845 | LOC106603305 | other | upstream | 521802 | 38755443 ~ 38815017 (+) |
| G883966 | NA | other | upstream | 2482788 | 36849646 ~ 36851153 (+) |
| LOC110533788 | NA | other | upstream | 2532356 | 36799376 ~ 36801589 (+) |
| G883473 | om-i | other | upstream | 3038394 | 36292302 ~ 36295572 (+) |
| LOC110533748 | prps1 | other | upstream | 3647368 | 35674201 ~ 35686573 (+) |
| G889906 | LOC106603262 | other | downstream | 2377551 | 41712327 ~ 41717292 (+) |
| G890228 | NA | other | downstream | 2743439 | 42078215 ~ 42154093 (+) |
| G891133 | NA | other | downstream | 3647906 | 42982682 ~ 43109676 (+) |
| G891188 | NA | other | downstream | 3761944 | 43096720 ~ 43097617 (+) |
| G891741 | NA | other | downstream | 4199540 | 43534316 ~ 43600230 (+) |
