Gene
RNA
| Item | Value |
|---|---|
| gene id | G887416 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 39359314 ~ 39362349 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1009616 | True | 223 | lncRNA | 0.48 | 3 | 39359314 | 39362349 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533862 | NA | coding | downstream | 159393 | 39197965 ~ 39199921 (-) |
| rpl36a | LOC106568029 | coding | downstream | 173736 | 39183698 ~ 39185578 (-) |
| LOC110534920 | LOC106603297 | coding | downstream | 237476 | 39120154 ~ 39121838 (-) |
| LOC110533857 | LOC106603298 | coding | downstream | 263238 | 39024243 ~ 39096076 (-) |
| radx | cssa04hxorf57 | coding | downstream | 343194 | 39006334 ~ 39016120 (-) |
| LOC110533865 | LOC106603290 | coding | upstream | 279639 | 39641988 ~ 39671377 (-) |
| LOC110533866 | LOC106603288 | coding | upstream | 309224 | 39671573 ~ 39748431 (-) |
| LOC110533869 | LOC106603287 | coding | upstream | 408941 | 39771290 ~ 39775768 (-) |
| LOC110533108 | LOC106603286 | coding | upstream | 427528 | 39789877 ~ 39808636 (-) |
| LOC118966773 | NA | coding | upstream | 433427 | 39795348 ~ 39796606 (-) |
| G887397 | NA | non-coding | downstream | 49892 | 39307424 ~ 39309422 (-) |
| G887333 | LOC106591448 | non-coding | downstream | 137538 | 39221531 ~ 39221776 (-) |
| G887328 | NA | non-coding | downstream | 143138 | 39215909 ~ 39216176 (-) |
| G887324 | NA | non-coding | downstream | 149539 | 39209354 ~ 39209775 (-) |
| G886950 | LOC100194703 | non-coding | downstream | 155751 | 39203308 ~ 39203563 (-) |
| G887528 | NA | non-coding | upstream | 217677 | 39580026 ~ 39580792 (-) |
| G887529 | NA | non-coding | upstream | 218793 | 39581142 ~ 39587980 (-) |
| G887530 | NA | non-coding | upstream | 220764 | 39583113 ~ 39586597 (-) |
| G887532 | NA | non-coding | upstream | 222942 | 39585291 ~ 39587122 (-) |
| G887535 | NA | non-coding | upstream | 238216 | 39600565 ~ 39601211 (-) |
| G887329 | NA | other | downstream | 141576 | 39217313 ~ 39217738 (-) |
| G885767 | NA | other | downstream | 1118755 | 38238950 ~ 38240559 (-) |
| LOC110533823 | LOC106603321 | other | downstream | 1655528 | 37518096 ~ 37704039 (-) |
| G884736 | NA | other | downstream | 2040450 | 37316917 ~ 37318864 (-) |
| ksr1a | LOC106603285 | other | upstream | 492617 | 39843126 ~ 39893728 (-) |
| LOC110533878 | LOC106603271 | other | upstream | 1134365 | 40496714 ~ 40547393 (-) |
| G890360 | LOC106603260 | other | upstream | 2620352 | 41982701 ~ 41984417 (-) |
| G890385 | LOC100136012 | other | upstream | 2625362 | 41987711 ~ 41989801 (-) |
| G890403 | NA | other | upstream | 2714392 | 42076741 ~ 42077947 (-) |
