Gene
RNA
| Item | Value |
|---|---|
| gene id | G887564 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 39640799 ~ 39641246 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1009778 | True | 448 | lncRNA | 0.39 | 1 | 39640799 | 39641246 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533864 | LOC106603292 | coding | downstream | 6114 | 39310186 ~ 39634685 (-) |
| LOC110533862 | NA | coding | downstream | 440878 | 39197965 ~ 39199921 (-) |
| rpl36a | LOC106568029 | coding | downstream | 455221 | 39183698 ~ 39185578 (-) |
| LOC110534920 | LOC106603297 | coding | downstream | 518961 | 39120154 ~ 39121838 (-) |
| LOC110533857 | LOC106603298 | coding | downstream | 544723 | 39024243 ~ 39096076 (-) |
| LOC110533865 | LOC106603290 | coding | upstream | 742 | 39641988 ~ 39671377 (-) |
| LOC110533866 | LOC106603288 | coding | upstream | 30327 | 39671573 ~ 39748431 (-) |
| LOC110533869 | LOC106603287 | coding | upstream | 130044 | 39771290 ~ 39775768 (-) |
| LOC110533108 | LOC106603286 | coding | upstream | 148631 | 39789877 ~ 39808636 (-) |
| LOC118966773 | NA | coding | upstream | 154530 | 39795348 ~ 39796606 (-) |
| G887535 | NA | non-coding | downstream | 39588 | 39600565 ~ 39601211 (-) |
| G887529 | NA | non-coding | downstream | 52819 | 39581142 ~ 39587980 (-) |
| G887532 | NA | non-coding | downstream | 53677 | 39585291 ~ 39587122 (-) |
| G887530 | NA | non-coding | downstream | 54202 | 39583113 ~ 39586597 (-) |
| G887528 | NA | non-coding | downstream | 60007 | 39580026 ~ 39580792 (-) |
| G887563 | NA | non-coding | upstream | 291 | 39641537 ~ 39641759 (-) |
| G887595 | NA | non-coding | upstream | 93621 | 39734867 ~ 39735143 (-) |
| G887596 | NA | non-coding | upstream | 94353 | 39735599 ~ 39735802 (-) |
| G887606 | NA | non-coding | upstream | 107812 | 39749058 ~ 39749338 (-) |
| G887329 | NA | other | downstream | 423061 | 39217313 ~ 39217738 (-) |
| G885767 | NA | other | downstream | 1400240 | 38238950 ~ 38240559 (-) |
| LOC110533823 | LOC106603321 | other | downstream | 1937013 | 37518096 ~ 37704039 (-) |
| G884736 | NA | other | downstream | 2321935 | 37316917 ~ 37318864 (-) |
| ksr1a | LOC106603285 | other | upstream | 213720 | 39843126 ~ 39893728 (-) |
| LOC110533878 | LOC106603271 | other | upstream | 855468 | 40496714 ~ 40547393 (-) |
| G890360 | LOC106603260 | other | upstream | 2341455 | 41982701 ~ 41984417 (-) |
| G890385 | LOC100136012 | other | upstream | 2346465 | 41987711 ~ 41989801 (-) |
| G890403 | NA | other | upstream | 2435495 | 42076741 ~ 42077947 (-) |
