Gene
RNA
| Item | Value |
|---|---|
| gene id | G887311 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 39731617 ~ 39731848 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1009500 | True | 232 | lncRNA | 0.46 | 1 | 39731617 | 39731848 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533867 | LOC106603289 | coding | upstream | 21125 | 39707335 ~ 39710492 (+) |
| LOC110533868 | NA | coding | upstream | 25038 | 39704518 ~ 39706579 (+) |
| LOC110533863 | LOC106603293 | coding | upstream | 497405 | 39227030 ~ 39234212 (+) |
| LOC110533860 | LOC106568029 | coding | upstream | 546560 | 39157811 ~ 39185062 (+) |
| LOC110533859 | LOC106603296 | coding | upstream | 583933 | 39143458 ~ 39147684 (+) |
| LOC118966774 | NA | coding | downstream | 55853 | 39787701 ~ 39789535 (+) |
| LOC110533109 | LOC106603283 | coding | downstream | 243322 | 39975170 ~ 39977790 (+) |
| LOC110533873 | LOC106603279 | coding | downstream | 251194 | 39983042 ~ 40090027 (+) |
| LOC110533874 | LOC106603277 | coding | downstream | 420183 | 40152031 ~ 40360429 (+) |
| trnaa-ugc-41 | NA | coding | downstream | 493822 | 40225670 ~ 40225745 (+) |
| G887287 | NA | non-coding | upstream | 33631 | 39697487 ~ 39697986 (+) |
| G887275 | LOC106603288 | non-coding | upstream | 50845 | 39678929 ~ 39680772 (+) |
| G887265 | NA | non-coding | upstream | 53170 | 39677717 ~ 39678447 (+) |
| G887274 | NA | non-coding | upstream | 55339 | 39671707 ~ 39676278 (+) |
| G887250 | NA | non-coding | upstream | 90282 | 39641125 ~ 39641335 (+) |
| G887614 | NA | non-coding | downstream | 26226 | 39758074 ~ 39805040 (+) |
| G887625 | LOC106603287 | non-coding | downstream | 39445 | 39771293 ~ 39776652 (+) |
| G887632 | NA | non-coding | downstream | 51990 | 39783838 ~ 39801991 (+) |
| G887662 | NA | non-coding | downstream | 102088 | 39833936 ~ 39834169 (+) |
| G887740 | NA | non-coding | downstream | 233848 | 39965696 ~ 39965895 (+) |
| LOC110533845 | LOC106603305 | other | upstream | 919478 | 38755443 ~ 38815017 (+) |
| G883966 | NA | other | upstream | 2880464 | 36849646 ~ 36851153 (+) |
| LOC110533788 | NA | other | upstream | 2930032 | 36799376 ~ 36801589 (+) |
| G883473 | om-i | other | upstream | 3436070 | 36292302 ~ 36295572 (+) |
| LOC110533748 | prps1 | other | upstream | 4045044 | 35674201 ~ 35686573 (+) |
| G889906 | LOC106603262 | other | downstream | 1980479 | 41712327 ~ 41717292 (+) |
| G890228 | NA | other | downstream | 2346367 | 42078215 ~ 42154093 (+) |
| G891133 | NA | other | downstream | 3250834 | 42982682 ~ 43109676 (+) |
| G891188 | NA | other | downstream | 3364872 | 43096720 ~ 43097617 (+) |
| G891741 | NA | other | downstream | 3802468 | 43534316 ~ 43600230 (+) |
