Gene
RNA
| Item | Value |
|---|---|
| gene id | G888141 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 39837604 ~ 39837873 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109060149 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1010457 | True | 270 | lncRNA | 0.47 | 1 | 39837604 | 39837873 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533108 | LOC106603286 | coding | downstream | 28968 | 39789877 ~ 39808636 (-) |
| LOC118966773 | NA | coding | downstream | 40998 | 39795348 ~ 39796606 (-) |
| LOC110533869 | LOC106603287 | coding | downstream | 61836 | 39771290 ~ 39775768 (-) |
| LOC110533866 | LOC106603288 | coding | downstream | 89173 | 39671573 ~ 39748431 (-) |
| LOC110533865 | LOC106603290 | coding | downstream | 166227 | 39641988 ~ 39671377 (-) |
| ksr1a | LOC106603285 | coding | upstream | 5253 | 39843126 ~ 39893728 (-) |
| LOC110533871 | LOC106603284 | coding | upstream | 66299 | 39904172 ~ 39919322 (-) |
| LOC110533872 | LOC106603282 | coding | upstream | 82888 | 39920761 ~ 39964811 (-) |
| LOC110533878 | LOC106603271 | coding | upstream | 658847 | 40496714 ~ 40547393 (-) |
| LOC110533881 | LOC106603270 | coding | upstream | 793292 | 40631165 ~ 40639661 (-) |
| G888113 | NA | non-coding | downstream | 3791 | 39833427 ~ 39833813 (-) |
| G888112 | NA | non-coding | downstream | 7330 | 39797121 ~ 39830274 (-) |
| G887606 | NA | non-coding | downstream | 88266 | 39749058 ~ 39749338 (-) |
| G887596 | NA | non-coding | downstream | 101802 | 39735599 ~ 39735802 (-) |
| G888135 | NA | non-coding | upstream | 58981 | 39896854 ~ 39899447 (-) |
| G888272 | NA | non-coding | upstream | 236117 | 40073990 ~ 40075124 (-) |
| G888286 | NA | non-coding | upstream | 269337 | 40107210 ~ 40107587 (-) |
| G888287 | NA | non-coding | upstream | 270069 | 40107942 ~ 40108218 (-) |
| G888288 | NA | non-coding | upstream | 270552 | 40108425 ~ 40108708 (-) |
| G887329 | NA | other | downstream | 619866 | 39217313 ~ 39217738 (-) |
| rpl36a | LOC106568029 | other | downstream | 652110 | 39183698 ~ 39185578 (-) |
| G885767 | NA | other | downstream | 1597045 | 38238950 ~ 38240559 (-) |
| LOC110533823 | LOC106603321 | other | downstream | 2133818 | 37518096 ~ 37704039 (-) |
| G884736 | NA | other | downstream | 2518740 | 37316917 ~ 37318864 (-) |
| G890360 | LOC106603260 | other | upstream | 2144828 | 41982701 ~ 41984417 (-) |
| G890385 | LOC100136012 | other | upstream | 2149838 | 41987711 ~ 41989801 (-) |
| G890403 | NA | other | upstream | 2238868 | 42076741 ~ 42077947 (-) |
