Gene
RNA
| Item | Value |
|---|---|
| gene id | G888272 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 40073990 ~ 40075124 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: unconventional myosin-XVIIIa-like isoform X5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1010592 | True | 226 | lncRNA | 0.57 | 2 | 40073990 | 40075124 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533872 | LOC106603282 | coding | downstream | 109179 | 39920761 ~ 39964811 (-) |
| LOC110533871 | LOC106603284 | coding | downstream | 154668 | 39904172 ~ 39919322 (-) |
| ksr1a | LOC106603285 | coding | downstream | 180262 | 39843126 ~ 39893728 (-) |
| LOC110533108 | LOC106603286 | coding | downstream | 265354 | 39789877 ~ 39808636 (-) |
| LOC118966773 | NA | coding | downstream | 277384 | 39795348 ~ 39796606 (-) |
| LOC110533878 | LOC106603271 | coding | upstream | 421596 | 40496714 ~ 40547393 (-) |
| LOC110533881 | LOC106603270 | coding | upstream | 556041 | 40631165 ~ 40639661 (-) |
| LOC110533882 | LOC106603268 | coding | upstream | 764978 | 40840102 ~ 40853480 (-) |
| LOC110533890 | LOC106603263 | coding | upstream | 1181700 | 41256824 ~ 41441750 (-) |
| LOC110533111 | LOC106603235 | coding | upstream | 1399863 | 41474987 ~ 41475979 (-) |
| G888135 | NA | non-coding | downstream | 174543 | 39896854 ~ 39899447 (-) |
| G888141 | NA | non-coding | downstream | 236117 | 39837604 ~ 39837873 (-) |
| G888113 | NA | non-coding | downstream | 240177 | 39833427 ~ 39833813 (-) |
| G888112 | NA | non-coding | downstream | 243716 | 39797121 ~ 39830274 (-) |
| G888286 | NA | non-coding | upstream | 32086 | 40107210 ~ 40107587 (-) |
| G888287 | NA | non-coding | upstream | 32818 | 40107942 ~ 40108218 (-) |
| G888288 | NA | non-coding | upstream | 33301 | 40108425 ~ 40108708 (-) |
| G888293 | NA | non-coding | upstream | 39534 | 40114658 ~ 40114903 (-) |
| G888437 | NA | non-coding | upstream | 255896 | 40331020 ~ 40378875 (-) |
| G887329 | NA | other | downstream | 856252 | 39217313 ~ 39217738 (-) |
| rpl36a | LOC106568029 | other | downstream | 888496 | 39183698 ~ 39185578 (-) |
| G885767 | NA | other | downstream | 1833431 | 38238950 ~ 38240559 (-) |
| LOC110533823 | LOC106603321 | other | downstream | 2370204 | 37518096 ~ 37704039 (-) |
| G890360 | LOC106603260 | other | upstream | 1907577 | 41982701 ~ 41984417 (-) |
| G890385 | LOC100136012 | other | upstream | 1912587 | 41987711 ~ 41989801 (-) |
| G890403 | NA | other | upstream | 2001617 | 42076741 ~ 42077947 (-) |
| LOC110533946 | mpp1 | other | upstream | 2983886 | 43057611 ~ 43070230 (-) |
