Gene
RNA
| Item | Value |
|---|---|
| gene id | G888504 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 40461676 ~ 40462016 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1010851 | True | 341 | lncRNA | 0.36 | 1 | 40461676 | 40462016 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533872 | LOC106603282 | coding | downstream | 496865 | 39920761 ~ 39964811 (-) |
| LOC110533871 | LOC106603284 | coding | downstream | 542354 | 39904172 ~ 39919322 (-) |
| ksr1a | LOC106603285 | coding | downstream | 567948 | 39843126 ~ 39893728 (-) |
| LOC110533108 | LOC106603286 | coding | downstream | 653040 | 39789877 ~ 39808636 (-) |
| LOC110533878 | LOC106603271 | coding | upstream | 34704 | 40496714 ~ 40547393 (-) |
| LOC110533881 | LOC106603270 | coding | upstream | 169149 | 40631165 ~ 40639661 (-) |
| LOC110533882 | LOC106603268 | coding | upstream | 378086 | 40840102 ~ 40853480 (-) |
| LOC110533890 | LOC106603263 | coding | upstream | 794808 | 41256824 ~ 41441750 (-) |
| LOC110533111 | LOC106603235 | coding | upstream | 1012971 | 41474987 ~ 41475979 (-) |
| G888485 | NA | non-coding | downstream | 24737 | 40436714 ~ 40436939 (-) |
| G888437 | NA | non-coding | downstream | 82801 | 40331020 ~ 40378875 (-) |
| G888293 | NA | non-coding | downstream | 346773 | 40114658 ~ 40114903 (-) |
| G888288 | NA | non-coding | downstream | 352968 | 40108425 ~ 40108708 (-) |
| G888287 | NA | non-coding | downstream | 353458 | 40107942 ~ 40108218 (-) |
| G888505 | NA | non-coding | upstream | 334 | 40462350 ~ 40462564 (-) |
| G888612 | NA | non-coding | upstream | 192951 | 40654967 ~ 40655198 (-) |
| G888687 | NA | non-coding | upstream | 261413 | 40723429 ~ 40723710 (-) |
| G888700 | NA | non-coding | upstream | 268874 | 40730890 ~ 40731782 (-) |
| G888722 | NA | non-coding | upstream | 285348 | 40747364 ~ 40747573 (-) |
| G887329 | NA | other | downstream | 1243938 | 39217313 ~ 39217738 (-) |
| rpl36a | LOC106568029 | other | downstream | 1276182 | 39183698 ~ 39185578 (-) |
| G885767 | NA | other | downstream | 2221117 | 38238950 ~ 38240559 (-) |
| LOC110533823 | LOC106603321 | other | downstream | 2757890 | 37518096 ~ 37704039 (-) |
| G890360 | LOC106603260 | other | upstream | 1520685 | 41982701 ~ 41984417 (-) |
| G890385 | LOC100136012 | other | upstream | 1525695 | 41987711 ~ 41989801 (-) |
| G890403 | NA | other | upstream | 1614725 | 42076741 ~ 42077947 (-) |
| LOC110533946 | mpp1 | other | upstream | 2596994 | 43057611 ~ 43070230 (-) |
