Gene
RNA
| Item | Value |
|---|---|
| gene id | G888596 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 40644369 ~ 40644587 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1010949 | True | 219 | lncRNA | 0.32 | 1 | 40644369 | 40644587 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| aatf | LOC106603273 | coding | upstream | 148429 | 40479739 ~ 40495940 (+) |
| LOC110533880 | LOC106603274 | coding | upstream | 168574 | 40470019 ~ 40475795 (+) |
| LOC110533877 | LOC106603276 | coding | upstream | 250715 | 40391376 ~ 40393654 (+) |
| LOC110533875 | LOC106603275 | coding | upstream | 265447 | 40366196 ~ 40378922 (+) |
| trnaa-ugc-41 | NA | coding | upstream | 418624 | 40225670 ~ 40225745 (+) |
| LOC110533884 | LOC105010779 | coding | downstream | 216764 | 40861351 ~ 40879099 (+) |
| LOC110533885 | LOC106603267 | coding | downstream | 236523 | 40881110 ~ 40909990 (+) |
| LOC110533886 | LOC106568122 | coding | downstream | 265540 | 40910127 ~ 40917502 (+) |
| LOC110533887 | LOC106603266 | coding | downstream | 275982 | 40920569 ~ 40937315 (+) |
| LOC110533888 | LOC106603264 | coding | downstream | 385144 | 41029731 ~ 41240128 (+) |
| G888021 | NA | non-coding | upstream | 96621 | 40514160 ~ 40547748 (+) |
| G888029 | NA | non-coding | upstream | 116053 | 40523500 ~ 40528316 (+) |
| G888019 | NA | non-coding | upstream | 130461 | 40512443 ~ 40513908 (+) |
| G887978 | NA | non-coding | upstream | 146064 | 40496717 ~ 40498305 (+) |
| G887979 | NA | non-coding | upstream | 214108 | 40430040 ~ 40430261 (+) |
| G888636 | NA | non-coding | downstream | 52797 | 40697384 ~ 40697673 (+) |
| G888695 | NA | non-coding | downstream | 84117 | 40728704 ~ 40728963 (+) |
| G888698 | NA | non-coding | downstream | 86311 | 40730898 ~ 40731145 (+) |
| G888742 | NA | non-coding | downstream | 116262 | 40760849 ~ 40761130 (+) |
| G888755 | NA | non-coding | downstream | 133968 | 40778555 ~ 40778835 (+) |
| LOC110533845 | LOC106603305 | other | upstream | 1832230 | 38755443 ~ 38815017 (+) |
| G883966 | NA | other | upstream | 3793216 | 36849646 ~ 36851153 (+) |
| LOC110533788 | NA | other | upstream | 3842784 | 36799376 ~ 36801589 (+) |
| G883473 | om-i | other | upstream | 4348822 | 36292302 ~ 36295572 (+) |
| LOC110533748 | prps1 | other | upstream | 4957796 | 35674201 ~ 35686573 (+) |
| G889906 | LOC106603262 | other | downstream | 1067740 | 41712327 ~ 41717292 (+) |
| G890228 | NA | other | downstream | 1433628 | 42078215 ~ 42154093 (+) |
| G891133 | NA | other | downstream | 2338095 | 42982682 ~ 43109676 (+) |
| G891188 | NA | other | downstream | 2452133 | 43096720 ~ 43097617 (+) |
| G891741 | NA | other | downstream | 2889729 | 43534316 ~ 43600230 (+) |
