Gene
RNA
| Item | Value |
|---|---|
| gene id | G888695 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 40728704 ~ 40728963 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1011050 | True | 260 | lncRNA | 0.44 | 1 | 40728704 | 40728963 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| aatf | LOC106603273 | coding | upstream | 232764 | 40479739 ~ 40495940 (+) |
| LOC110533880 | LOC106603274 | coding | upstream | 252909 | 40470019 ~ 40475795 (+) |
| LOC110533877 | LOC106603276 | coding | upstream | 335050 | 40391376 ~ 40393654 (+) |
| LOC110533875 | LOC106603275 | coding | upstream | 349782 | 40366196 ~ 40378922 (+) |
| trnaa-ugc-41 | NA | coding | upstream | 502959 | 40225670 ~ 40225745 (+) |
| LOC110533884 | LOC105010779 | coding | downstream | 132388 | 40861351 ~ 40879099 (+) |
| LOC110533885 | LOC106603267 | coding | downstream | 152147 | 40881110 ~ 40909990 (+) |
| LOC110533886 | LOC106568122 | coding | downstream | 181164 | 40910127 ~ 40917502 (+) |
| LOC110533887 | LOC106603266 | coding | downstream | 191606 | 40920569 ~ 40937315 (+) |
| LOC110533888 | LOC106603264 | coding | downstream | 300768 | 41029731 ~ 41240128 (+) |
| G888636 | NA | non-coding | upstream | 31031 | 40697384 ~ 40697673 (+) |
| G888596 | NA | non-coding | upstream | 84117 | 40644369 ~ 40644587 (+) |
| G888021 | NA | non-coding | upstream | 180956 | 40514160 ~ 40547748 (+) |
| G888029 | NA | non-coding | upstream | 200388 | 40523500 ~ 40528316 (+) |
| G888019 | NA | non-coding | upstream | 214796 | 40512443 ~ 40513908 (+) |
| G888698 | NA | non-coding | downstream | 1935 | 40730898 ~ 40731145 (+) |
| G888742 | NA | non-coding | downstream | 31886 | 40760849 ~ 40761130 (+) |
| G888755 | NA | non-coding | downstream | 49592 | 40778555 ~ 40778835 (+) |
| G888779 | NA | non-coding | downstream | 81133 | 40810096 ~ 40810491 (+) |
| G888789 | NA | non-coding | downstream | 103258 | 40832221 ~ 40832487 (+) |
| LOC110533845 | LOC106603305 | other | upstream | 1916565 | 38755443 ~ 38815017 (+) |
| G883966 | NA | other | upstream | 3877551 | 36849646 ~ 36851153 (+) |
| LOC110533788 | NA | other | upstream | 3927119 | 36799376 ~ 36801589 (+) |
| G883473 | om-i | other | upstream | 4433157 | 36292302 ~ 36295572 (+) |
| LOC110533748 | prps1 | other | upstream | 5042131 | 35674201 ~ 35686573 (+) |
| G889906 | LOC106603262 | other | downstream | 983364 | 41712327 ~ 41717292 (+) |
| G890228 | NA | other | downstream | 1349252 | 42078215 ~ 42154093 (+) |
| G891133 | NA | other | downstream | 2253719 | 42982682 ~ 43109676 (+) |
| G891188 | NA | other | downstream | 2367757 | 43096720 ~ 43097617 (+) |
| G891741 | NA | other | downstream | 2805353 | 43534316 ~ 43600230 (+) |
