G888752



Basic Information


Item Value
gene id G888752
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 40775918 ~ 40776146 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1011111
GCATATCAATGAAAAAGCATAGCATTTGCTGTTACCCATCCGATTTTTTGACAATTCTGTGAGCTTGAGAATGAGTTGTCTGTAAGCAAGATGGTGTTAAAGCTTCACAGCTGTACAGGTAAGCAAGAGGGTGTTAGAGCTTCACAGCTGTACAGGTAAGTAAGAGGGTGTTAGAGCTTCACAGCTGTACAGGTAAGCAAGAGGGTGTTAGAGCTTCACAGCTGTACAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1011111 True 229 lncRNA 0.43 1 40775918 40776146

Neighbor


gene id symbol gene type direction distance location
LOC110533881 LOC106603270 coding downstream 136257 40631165 ~ 40639661 (-)
LOC110533878 LOC106603271 coding downstream 228525 40496714 ~ 40547393 (-)
LOC110533872 LOC106603282 coding downstream 811107 39920761 ~ 39964811 (-)
LOC110533871 LOC106603284 coding downstream 856596 39904172 ~ 39919322 (-)
ksr1a LOC106603285 coding downstream 882190 39843126 ~ 39893728 (-)
LOC110533882 LOC106603268 coding upstream 63956 40840102 ~ 40853480 (-)
LOC110533890 LOC106603263 coding upstream 480678 41256824 ~ 41441750 (-)
LOC110533111 LOC106603235 coding upstream 698841 41474987 ~ 41475979 (-)
LOC110533892 LOC106603262 coding upstream 936165 41712311 ~ 41806880 (-)
LOC110533896 LOC106603257 coding upstream 1228680 42004826 ~ 42011726 (-)
G888722 NA non-coding downstream 28345 40747364 ~ 40747573 (-)
G888700 NA non-coding downstream 44136 40730890 ~ 40731782 (-)
G888687 NA non-coding downstream 52208 40723429 ~ 40723710 (-)
G888612 NA non-coding downstream 120720 40654967 ~ 40655198 (-)
G888505 NA non-coding downstream 313354 40462350 ~ 40462564 (-)
G888756 NA non-coding upstream 3377 40779523 ~ 40779925 (-)
G888757 NA non-coding upstream 6271 40782417 ~ 40782714 (-)
G889211 NA non-coding upstream 14398 40790544 ~ 40790847 (-)
G889213 NA non-coding upstream 17535 40793681 ~ 40793927 (-)
G889214 NA non-coding upstream 18084 40794230 ~ 40794463 (-)
G887329 NA other downstream 1558180 39217313 ~ 39217738 (-)
rpl36a LOC106568029 other downstream 1590424 39183698 ~ 39185578 (-)
G885767 NA other downstream 2535359 38238950 ~ 38240559 (-)
G890360 LOC106603260 other upstream 1206555 41982701 ~ 41984417 (-)
G890385 LOC100136012 other upstream 1211565 41987711 ~ 41989801 (-)
G890403 NA other upstream 1300595 42076741 ~ 42077947 (-)
LOC110533946 mpp1 other upstream 2282864 43057611 ~ 43070230 (-)
LOC110533954 LOC106603192 other upstream 2417536 43183815 ~ 43248006 (-)

Expression



Co-expression Network